Protein–RNA interactions for Protein: Q01844

EWSR1, RNA-binding protein EWS, humanhuman

Known RBP eCLIP

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1Q01844 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.071e-6■■■■□ 22.1
EWSR1Q01844 MED22-205ENST00000471524 879 ntTSL 314.54□□□□□ -0.086e-6■■■■□ 22.1
EWSR1Q01844 LINC-PINT-205ENST00000433079 1262 ntTSL 1 (best)14.37□□□□□ -0.116e-7■■■■□ 22.1
EWSR1Q01844 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.146e-6■■■■□ 22.1
EWSR1Q01844 MNT-206ENST00000574559 580 ntTSL 414.01□□□□□ -0.176e-6■■■■□ 22.1
EWSR1Q01844 LDLR-206ENST00000557958 1881 ntTSL 213.93□□□□□ -0.186e-6■■■■□ 22.1
EWSR1Q01844 MED22-207ENST00000494177 532 ntTSL 413.81□□□□□ -0.26e-6■■■■□ 22.1
EWSR1Q01844 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.62□□□□□ -0.236e-6■■■■□ 22.1
EWSR1Q01844 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.61□□□□□ -0.236e-6■■■■□ 22.1
EWSR1Q01844 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.276e-6■■■■□ 22.1
EWSR1Q01844 BRF1-217ENST00000550375 1362 ntTSL 313.07□□□□□ -0.326e-6■■■■□ 22.1
EWSR1Q01844 TSNARE1-207ENST00000521825 346 ntTSL 313□□□□□ -0.336e-6■■■■□ 22.1
EWSR1Q01844 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.87□□□□□ -0.356e-6■■■■□ 22.1
EWSR1Q01844 SLC12A7-205ENST00000514994 586 ntTSL 312.86□□□□□ -0.356e-6■■■■□ 22.1
EWSR1Q01844 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.78□□□□□ -0.366e-6■■■■□ 22.1
EWSR1Q01844 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.426e-6■■■■□ 22.1
EWSR1Q01844 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.436e-6■■■■□ 22.1
EWSR1Q01844 MED22-206ENST00000482295 491 ntTSL 312.18□□□□□ -0.466e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.466e-6■■■■□ 22.1
EWSR1Q01844 MED22-204ENST00000457204 561 ntTSL 412.06□□□□□ -0.486e-6■■■■□ 22.1
EWSR1Q01844 ATP2A3-207ENST00000570773 989 ntTSL 211.74□□□□□ -0.532e-7■■■■□ 22.1
EWSR1Q01844 HDAC4-214ENST00000535493 2743 ntTSL 211.65□□□□□ -0.556e-6■■■■□ 22.1
EWSR1Q01844 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.556e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.596e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.27□□□□□ -0.616e-6■■■■□ 22.1
EWSR1Q01844 ING5-210ENST00000492488 822 ntTSL 211.25□□□□□ -0.616e-6■■■■□ 22.1
EWSR1Q01844 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC11.25□□□□□ -0.616e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-206ENST00000527820 3211 ntTSL 1 (best)11.23□□□□□ -0.616e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC11.09□□□□□ -0.636e-6■■■■□ 22.1
EWSR1Q01844 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.646e-6■■■■□ 22.1
EWSR1Q01844 ING5-209ENST00000489509 920 ntTSL 211.05□□□□□ -0.646e-6■■■■□ 22.1
EWSR1Q01844 LDLR-213ENST00000560502 509 ntTSL 211.01□□□□□ -0.656e-6■■■■□ 22.1
EWSR1Q01844 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.656e-6■■■■□ 22.1
EWSR1Q01844 HDAC4-204ENST00000446876 554 ntTSL 410.86□□□□□ -0.676e-6■■■■□ 22.1
EWSR1Q01844 HDAC4-208ENST00000463007 3158 ntTSL 1 (best)10.77□□□□□ -0.686e-6■■■■□ 22.1
EWSR1Q01844 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.76e-6■■■■□ 22.1
EWSR1Q01844 PPP6R2-208ENST00000473283 550 ntTSL 410.55□□□□□ -0.726e-6■■■■□ 22.1
EWSR1Q01844 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC10.37□□□□□ -0.756e-7■■■■□ 22.1
EWSR1Q01844 AXIN1-203ENST00000457798 334 ntTSL 310.08□□□□□ -0.86e-6■■■■□ 22.1
EWSR1Q01844 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.826e-6■■■■□ 22.1
EWSR1Q01844 ATP2A3-214ENST00000574999 776 ntTSL 39.73□□□□□ -0.852e-7■■■■□ 22.1
EWSR1Q01844 MED22-210ENST00000614493 3886 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.866e-6■■■■□ 22.1
EWSR1Q01844 TRIM25-205ENST00000572021 1555 ntTSL 1 (best)9.31□□□□□ -0.926e-6■■■■□ 22.1
EWSR1Q01844 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.986e-6■■■■□ 22.1
EWSR1Q01844 KMT5A-203ENST00000437502 901 ntTSL 58.91□□□□□ -0.986e-11■■■■□ 22.1
EWSR1Q01844 ATP2A3-210ENST00000572116 429 ntTSL 1 (best)8.72□□□□□ -1.012e-7■■■■□ 22.1
EWSR1Q01844 ATP2A3-208ENST00000570845 604 ntTSL 1 (best)8.72□□□□□ -1.012e-7■■■■□ 22.1
EWSR1Q01844 IGFL2-AS1-201ENST00000594027 294 ntTSL 38.52□□□□□ -1.056e-6■■■■□ 22.1
EWSR1Q01844 GDPD5-205ENST00000527322 1000 ntTSL 1 (best)8.36□□□□□ -1.076e-6■■■■□ 22.1
EWSR1Q01844 CBFA2T3-208ENST00000566868 284 ntTSL 58.31□□□□□ -1.086e-6■■■■□ 22.1
EWSR1Q01844 ING5-211ENST00000493261 543 ntTSL 28.3□□□□□ -1.086e-6■■■■□ 22.1
EWSR1Q01844 IGFL2-AS1-205ENST00000599817 340 ntTSL 27.94□□□□□ -1.146e-6■■■■□ 22.1
EWSR1Q01844 TRIM25-203ENST00000570473 498 ntTSL 37.75□□□□□ -1.176e-6■■■■□ 22.1
EWSR1Q01844 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC7.75□□□□□ -1.176e-6■■■■□ 22.1
EWSR1Q01844 ING5-204ENST00000445620 662 ntTSL 35.27□□□□□ -1.576e-6■■■■□ 22.1
EWSR1Q01844 FBXO11-204ENST00000424163 560 ntTSL 42.03□□□□□ -2.087e-8■■■■□ 22.1
EWSR1Q01844 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.128e-7■■■■□ 22.1
EWSR1Q01844 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.448e-7■■■■□ 22.1
EWSR1Q01844 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.423e-6■■■■□ 22.1
EWSR1Q01844 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.083e-6■■■■□ 22.1
EWSR1Q01844 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.33e-6■■■■□ 22.1
EWSR1Q01844 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.152e-6■■■■□ 22.1
EWSR1Q01844 RER1-201ENST00000306256 695 ntTSL 515.22■□□□□ 0.032e-7■■■■□ 22.1
EWSR1Q01844 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.242e-7■■■■□ 22.1
EWSR1Q01844 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.21□□□□□ -0.292e-7■■■■□ 22.1
EWSR1Q01844 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.45□□□□□ -0.422e-7■■■■□ 22.1
EWSR1Q01844 KLHDC4-210ENST00000562913 875 ntTSL 312.1□□□□□ -0.471e-7■■■■□ 22.1
EWSR1Q01844 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.431e-6■■■■□ 22.1
EWSR1Q01844 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.97■□□□□ 0.156e-7■■■■□ 22.1
EWSR1Q01844 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.99□□□□□ -0.336e-7■■■■□ 22.1
EWSR1Q01844 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.336e-7■■■■□ 22.1
EWSR1Q01844 TMCO3-204ENST00000462877 491 ntTSL 26.1□□□□□ -1.436e-7■■■■□ 22.1
EWSR1Q01844 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.197e-7■■■■□ 22.1
EWSR1Q01844 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.517e-7■■■■□ 22.1
EWSR1Q01844 UNKL-214ENST00000515195 481 ntTSL 412.02□□□□□ -0.492e-7■■■■□ 22.1
EWSR1Q01844 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.262e-6■■■■□ 22
EWSR1Q01844 PDXK-206ENST00000398085 796 ntTSL 316.02■□□□□ 0.161e-6■■■■□ 22
EWSR1Q01844 PDXK-212ENST00000470029 583 ntTSL 314.31□□□□□ -0.121e-6■■■■□ 22
EWSR1Q01844 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.94□□□□□ -0.51e-6■■■■□ 22
EWSR1Q01844 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.681e-6■■■■□ 22
EWSR1Q01844 JADE1-204ENST00000503785 584 ntTSL 416.74■□□□□ 0.271e-6■■■■□ 22
EWSR1Q01844 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.651e-6■■■■□ 22
EWSR1Q01844 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.761e-6■■■■□ 22
EWSR1Q01844 JADE1-212ENST00000514740 532 ntTSL 410.2□□□□□ -0.781e-6■■■■□ 22
EWSR1Q01844 JADE1-211ENST00000512960 3000 ntAPPRIS P3 TSL 2 BASIC8.59□□□□□ -1.041e-6■■■■□ 22
EWSR1Q01844 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.121e-6■■■■□ 22
EWSR1Q01844 JADE1-205ENST00000504089 567 ntTSL 47.91□□□□□ -1.141e-6■■■■□ 22
EWSR1Q01844 ADCY7-206ENST00000564044 575 ntTSL 310.92□□□□□ -0.661e-6■■■■□ 22
EWSR1Q01844 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.099e-7■■■■□ 22
EWSR1Q01844 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.83■□□□□ 0.771e-7■■■■□ 22
EWSR1Q01844 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.66■□□□□ 0.421e-7■■■■□ 22
EWSR1Q01844 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.59■□□□□ 0.251e-7■■■■□ 22
EWSR1Q01844 TPTEP1-202ENST00000400593 1430 ntTSL 1 (best)12.26□□□□□ -0.451e-7■■■■□ 22
EWSR1Q01844 TPTEP1-204ENST00000426585 5725 ntTSL 1 (best)11.25□□□□□ -0.611e-7■■■■□ 22
EWSR1Q01844 AP000547.3-203ENST00000591299 751 ntTSL 2 BASIC8.78□□□□□ -11e-7■■■■□ 22
EWSR1Q01844 SPPL2B-206ENST00000593243 551 ntTSL 411.42□□□□□ -0.585e-9■■■■□ 22
EWSR1Q01844 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.575e-8■■■■□ 21.9
EWSR1Q01844 POLR2H-201ENST00000412877 836 ntTSL 216.07■□□□□ 0.165e-8■■■■□ 21.9
EWSR1Q01844 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.84■□□□□ 0.135e-8■■■■□ 21.9
EWSR1Q01844 MVD-205ENST00000562981 537 ntTSL 212.41□□□□□ -0.424e-6■■■■□ 21.9
Retrieved 100 of 7,101 protein–RNA pairs in 80.1 ms