Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.65■■□□□ 1.06
GABREP78334 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.65■■□□□ 1.06
GABREP78334 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.65■■□□□ 1.06
GABREP78334 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
GABREP78334 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.65■■□□□ 1.06
GABREP78334 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.64■■□□□ 1.06
GABREP78334 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.64■■□□□ 1.06
GABREP78334 AC091060.1-201ENST00000623524 1766 ntBASIC21.64■■□□□ 1.06
GABREP78334 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.64■■□□□ 1.05
GABREP78334 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
GABREP78334 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
GABREP78334 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.64■■□□□ 1.05
GABREP78334 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.64■■□□□ 1.05
GABREP78334 AL031602.1-201ENST00000633169 911 ntBASIC21.64■■□□□ 1.05
GABREP78334 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.64■■□□□ 1.05
GABREP78334 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.63■■□□□ 1.05
GABREP78334 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.63■■□□□ 1.05
GABREP78334 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GABREP78334 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GABREP78334 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
GABREP78334 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.63■■□□□ 1.05
GABREP78334 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
GABREP78334 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.63■■□□□ 1.05
GABREP78334 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.63■■□□□ 1.05
GABREP78334 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.63■■□□□ 1.05
GABREP78334 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.63■■□□□ 1.05
GABREP78334 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.63■■□□□ 1.05
GABREP78334 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.63■■□□□ 1.05
GABREP78334 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
GABREP78334 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
GABREP78334 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
GABREP78334 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.62■■□□□ 1.05
GABREP78334 TSPY26P-201ENST00000476365 1326 ntBASIC21.62■■□□□ 1.05
GABREP78334 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GABREP78334 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.62■■□□□ 1.05
GABREP78334 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
GABREP78334 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GABREP78334 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
GABREP78334 SLC47A1P1-202ENST00000449666 945 ntBASIC21.62■■□□□ 1.05
GABREP78334 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.62■■□□□ 1.05
GABREP78334 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.62■■□□□ 1.05
GABREP78334 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.62■■□□□ 1.05
GABREP78334 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.61■■□□□ 1.05
GABREP78334 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
GABREP78334 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GABREP78334 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
GABREP78334 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.61■■□□□ 1.05
GABREP78334 pRNA.6-201ENST00000610482 90 ntBASIC21.61■■□□□ 1.05
GABREP78334 pRNA.5-201ENST00000612139 90 ntBASIC21.61■■□□□ 1.05
GABREP78334 pRNA.11-201ENST00000618423 90 ntBASIC21.61■■□□□ 1.05
GABREP78334 pRNA.13-201ENST00000619112 90 ntBASIC21.61■■□□□ 1.05
GABREP78334 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
GABREP78334 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.61■■□□□ 1.05
GABREP78334 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.6■■□□□ 1.05
GABREP78334 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
GABREP78334 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.6■■□□□ 1.05
GABREP78334 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.6■■□□□ 1.05
GABREP78334 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
GABREP78334 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
GABREP78334 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
GABREP78334 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
GABREP78334 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GABREP78334 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
GABREP78334 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
GABREP78334 DUX4L2-201ENST00000561772 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.59■■□□□ 1.05
GABREP78334 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.59■■□□□ 1.05
GABREP78334 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.59■■□□□ 1.05
GABREP78334 DUX4L6-201ENST00000626483 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 DUX4L1-201ENST00000627662 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 DUX4L8-201ENST00000629013 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 DUX4L3-201ENST00000630187 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 DUX4L7-201ENST00000630678 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 DUX4L5-201ENST00000630834 1275 ntBASIC21.59■■□□□ 1.05
GABREP78334 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.59■■□□□ 1.05
GABREP78334 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
GABREP78334 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
GABREP78334 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.59■■□□□ 1.05
GABREP78334 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GABREP78334 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GABREP78334 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.58■■□□□ 1.05
GABREP78334 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.58■■□□□ 1.05
GABREP78334 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
GABREP78334 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
GABREP78334 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.58■■□□□ 1.05
GABREP78334 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
GABREP78334 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
GABREP78334 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
GABREP78334 MIR6089-201ENST00000616698 64 ntBASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms