Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN12P56749 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.68■□□□□ 0.74
CLDN12P56749 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.68■□□□□ 0.74
CLDN12P56749 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CLDN12P56749 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.68■□□□□ 0.74
CLDN12P56749 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
CLDN12P56749 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLDN12P56749 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN12P56749 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN12P56749 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN12P56749 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN12P56749 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN12P56749 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.67■□□□□ 0.74
CLDN12P56749 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CLDN12P56749 AC090877.2-201ENST00000558441 1738 ntBASIC19.67■□□□□ 0.74
CLDN12P56749 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.67■□□□□ 0.74
CLDN12P56749 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
CLDN12P56749 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CLDN12P56749 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CLDN12P56749 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.66■□□□□ 0.74
CLDN12P56749 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN12P56749 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.66■□□□□ 0.74
CLDN12P56749 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CLDN12P56749 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CLDN12P56749 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.66■□□□□ 0.74
CLDN12P56749 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.66■□□□□ 0.74
CLDN12P56749 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN12P56749 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLDN12P56749 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.65■□□□□ 0.74
CLDN12P56749 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CLDN12P56749 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CLDN12P56749 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
CLDN12P56749 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN12P56749 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN12P56749 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN12P56749 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN12P56749 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.64■□□□□ 0.73
CLDN12P56749 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLDN12P56749 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.64■□□□□ 0.73
CLDN12P56749 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN12P56749 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CLDN12P56749 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.63■□□□□ 0.73
CLDN12P56749 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CLDN12P56749 ECEL1P1-201ENST00000373592 1742 ntBASIC19.63■□□□□ 0.73
CLDN12P56749 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 PKD1P6-201ENST00000343738 4769 ntBASIC19.63■□□□□ 0.73
CLDN12P56749 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.63■□□□□ 0.73
CLDN12P56749 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLDN12P56749 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLDN12P56749 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN12P56749 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.62■□□□□ 0.73
CLDN12P56749 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CLDN12P56749 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLDN12P56749 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CLDN12P56749 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 AC007375.3-201ENST00000600936 2314 ntBASIC19.62■□□□□ 0.73
CLDN12P56749 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLDN12P56749 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN12P56749 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CLDN12P56749 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CLDN12P56749 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.61■□□□□ 0.73
CLDN12P56749 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CLDN12P56749 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN12P56749 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN12P56749 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.6■□□□□ 0.73
CLDN12P56749 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN12P56749 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
CLDN12P56749 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CLDN12P56749 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms