Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP6P55212 AL161729.1-201ENST00000604104 1402 ntBASIC20.32■□□□□ 0.84
CASP6P55212 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.32■□□□□ 0.84
CASP6P55212 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASP6P55212 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP6P55212 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.31■□□□□ 0.84
CASP6P55212 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASP6P55212 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
CASP6P55212 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASP6P55212 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CASP6P55212 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASP6P55212 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CASP6P55212 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 SLC6A10P-202ENST00000431994 2058 ntBASIC20.3■□□□□ 0.84
CASP6P55212 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.3■□□□□ 0.84
CASP6P55212 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 AC126544.1-201ENST00000580842 1059 ntBASIC20.3■□□□□ 0.84
CASP6P55212 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.3■□□□□ 0.84
CASP6P55212 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASP6P55212 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CASP6P55212 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP6P55212 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.29■□□□□ 0.84
CASP6P55212 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.29■□□□□ 0.84
CASP6P55212 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP6P55212 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.29■□□□□ 0.84
CASP6P55212 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASP6P55212 MIR3181-201ENST00000578512 73 ntBASIC20.29■□□□□ 0.84
CASP6P55212 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP6P55212 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CASP6P55212 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASP6P55212 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.28■□□□□ 0.84
CASP6P55212 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.28■□□□□ 0.84
CASP6P55212 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASP6P55212 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASP6P55212 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP6P55212 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CASP6P55212 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.27■□□□□ 0.84
CASP6P55212 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASP6P55212 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASP6P55212 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CASP6P55212 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASP6P55212 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
CASP6P55212 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASP6P55212 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASP6P55212 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CASP6P55212 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 AC006455.2-201ENST00000429931 906 ntBASIC20.26■□□□□ 0.83
CASP6P55212 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CASP6P55212 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASP6P55212 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.26■□□□□ 0.83
CASP6P55212 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.26■□□□□ 0.83
CASP6P55212 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP6P55212 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASP6P55212 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CASP6P55212 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.25■□□□□ 0.83
CASP6P55212 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.25■□□□□ 0.83
CASP6P55212 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.25■□□□□ 0.83
CASP6P55212 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.25■□□□□ 0.83
CASP6P55212 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.25■□□□□ 0.83
CASP6P55212 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CASP6P55212 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CASP6P55212 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP6P55212 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP6P55212 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASP6P55212 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.24■□□□□ 0.83
CASP6P55212 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.24■□□□□ 0.83
CASP6P55212 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.24■□□□□ 0.83
CASP6P55212 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.24■□□□□ 0.83
CASP6P55212 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.24■□□□□ 0.83
CASP6P55212 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.24■□□□□ 0.83
CASP6P55212 AC034268.1-201ENST00000441047 882 ntBASIC20.24■□□□□ 0.83
CASP6P55212 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.24■□□□□ 0.83
CASP6P55212 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.24■□□□□ 0.83
CASP6P55212 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.24■□□□□ 0.83
CASP6P55212 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CASP6P55212 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.24■□□□□ 0.83
CASP6P55212 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASP6P55212 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASP6P55212 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASP6P55212 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASP6P55212 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CASP6P55212 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms