Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 tK(CUU)E2tK(CUU)E2 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)FtK(CUU)F 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)G1tK(CUU)G1 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)G2tK(CUU)G2 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)G3tK(CUU)G3 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)ItK(CUU)I 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)JtK(CUU)J 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)KtK(CUU)K 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)MtK(CUU)M 73 nt4.69□□□□□ -1.66
YNL040WP53960 tK(CUU)PtK(CUU)P 73 nt4.69□□□□□ -1.66
YNL040WP53960 FBP1YLR377C 1047 nt4.69□□□□□ -1.66
YNL040WP53960 OAZ1YPL052W 879 nt4.69□□□□□ -1.66
YNL040WP53960 NUP2YLR335W 2163 nt4.69□□□□□ -1.66
YNL040WP53960 PXA1YPL147W 2613 nt4.69□□□□□ -1.66
YNL040WP53960 RIP1YEL024W 648 nt4.68□□□□□ -1.66
YNL040WP53960 YIL021C-AYIL021C-A 270 nt4.68□□□□□ -1.66
YNL040WP53960 YIL171W-AYIL171W-A 453 nt4.68□□□□□ -1.66
YNL040WP53960 COA3YJL062W-A 258 nt4.68□□□□□ -1.66
YNL040WP53960 YJL220WYJL220W 453 nt4.68□□□□□ -1.66
YNL040WP53960 RPP0YLR340W 939 nt4.68□□□□□ -1.66
YNL040WP53960 YPL113CYPL113C 1191 nt4.68□□□□□ -1.66
YNL040WP53960 NMD3YHR170W 1557 nt4.68□□□□□ -1.66
YNL040WP53960 NOP58YOR310C 1536 nt4.67□□□□□ -1.66
YNL040WP53960 MET4YNL103W 2019 nt4.67□□□□□ -1.66
YNL040WP53960 ATG1YGL180W 2694 nt4.67□□□□□ -1.66
YNL040WP53960 CPR4YCR069W 957 nt4.67□□□□□ -1.66
YNL040WP53960 YKL107WYKL107W 930 nt4.67□□□□□ -1.66
YNL040WP53960 CIN5YOR028C 888 nt4.67□□□□□ -1.66
YNL040WP53960 POP4YBR257W 840 nt4.67□□□□□ -1.66
YNL040WP53960 IMA3YIL172C 1770 nt4.67□□□□□ -1.66
YNL040WP53960 IMA4YJL221C 1770 nt4.67□□□□□ -1.66
YNL040WP53960 GAD1YMR250W 1758 nt4.67□□□□□ -1.66
YNL040WP53960 YCR006CYCR006C 474 nt4.66□□□□□ -1.66
YNL040WP53960 YHL049CYHL049C 816 nt4.66□□□□□ -1.66
YNL040WP53960 tS(AGA)D3tS(AGA)D3 83 nt4.66□□□□□ -1.66
YNL040WP53960 CIA2YHR122W 696 nt4.66□□□□□ -1.66
YNL040WP53960 CCS1YMR038C 750 nt4.66□□□□□ -1.66
YNL040WP53960 YNL134CYNL134C 1131 nt4.66□□□□□ -1.66
YNL040WP53960 BUD17YNR027W 954 nt4.66□□□□□ -1.66
YNL040WP53960 PCA1YBR295W 3651 nt4.66□□□□□ -1.66
YNL040WP53960 EAR1YMR171C 1653 nt4.66□□□□□ -1.66
YNL040WP53960 MSC2YDR205W 2175 nt4.65□□□□□ -1.66
YNL040WP53960 HOF1YMR032W 2010 nt4.65□□□□□ -1.66
YNL040WP53960 VBA2YBR293W 1425 nt4.65□□□□□ -1.66
YNL040WP53960 CDC10YCR002C 969 nt4.65□□□□□ -1.67
YNL040WP53960 PDE1YGL248W 1110 nt4.65□□□□□ -1.67
YNL040WP53960 KRE9YJL174W 831 nt4.65□□□□□ -1.67
YNL040WP53960 YAL047W-AYAL047W-A 330 nt4.65□□□□□ -1.67
YNL040WP53960 TGS1YPL157W 948 nt4.65□□□□□ -1.67
YNL040WP53960 MPP10YJR002W 1782 nt4.65□□□□□ -1.67
YNL040WP53960 ARN2YHL047C 1863 nt4.64□□□□□ -1.67
YNL040WP53960 PEP5YMR231W 3090 nt4.64□□□□□ -1.67
YNL040WP53960 RAD16YBR114W 2373 nt4.64□□□□□ -1.67
YNL040WP53960 IPK1YDR315C 846 nt4.64□□□□□ -1.67
YNL040WP53960 LSO1YJR005C-A 282 nt4.64□□□□□ -1.67
YNL040WP53960 UBI4YLL039C 1146 nt4.64□□□□□ -1.67
YNL040WP53960 PCL1YNL289W 840 nt4.64□□□□□ -1.67
YNL040WP53960 ECM23YPL021W 564 nt4.64□□□□□ -1.67
YNL040WP53960 GRE1YPL223C 507 nt4.64□□□□□ -1.67
YNL040WP53960 ISR1YPR106W 1332 nt4.64□□□□□ -1.67
YNL040WP53960 HOYDL227C 1761 nt4.63□□□□□ -1.67
YNL040WP53960 YNL228WYNL228W 777 nt4.63□□□□□ -1.67
YNL040WP53960 YEH2YLR020C 1617 nt4.63□□□□□ -1.67
YNL040WP53960 CYM1YDR430C 2970 nt4.63□□□□□ -1.67
YNL040WP53960 SNF3YDL194W 2655 nt4.63□□□□□ -1.67
YNL040WP53960 KIC1YHR102W 3243 nt4.63□□□□□ -1.67
YNL040WP53960 FAA3YIL009W 2085 nt4.62□□□□□ -1.67
YNL040WP53960 URA3YEL021W 804 nt4.62□□□□□ -1.67
YNL040WP53960 SPR6YER115C 576 nt4.62□□□□□ -1.67
YNL040WP53960 LYS5YGL154C 819 nt4.62□□□□□ -1.67
YNL040WP53960 YHR095WYHR095W 495 nt4.62□□□□□ -1.67
YNL040WP53960 YGP1YNL160W 1065 nt4.62□□□□□ -1.67
YNL040WP53960 CAB3YKL088W 1716 nt4.62□□□□□ -1.67
YNL040WP53960 HOT1YMR172W 2160 nt4.62□□□□□ -1.67
YNL040WP53960 PRT1YOR361C 2292 nt4.62□□□□□ -1.67
YNL040WP53960 GPR1YDL035C 2886 nt4.62□□□□□ -1.67
YNL040WP53960 SAF1YBR280C 1914 nt4.62□□□□□ -1.67
YNL040WP53960 FAA4YMR246W 2085 nt4.61□□□□□ -1.67
YNL040WP53960 THI20YOL055C 1656 nt4.61□□□□□ -1.67
YNL040WP53960 PRP40YKL012W 1752 nt4.61□□□□□ -1.67
YNL040WP53960 SWC3YAL011W 1878 nt4.61□□□□□ -1.67
YNL040WP53960 PER1YCR044C 1074 nt4.61□□□□□ -1.67
YNL040WP53960 YIL165CYIL165C 360 nt4.61□□□□□ -1.67
YNL040WP53960 SCP1YOR367W 603 nt4.61□□□□□ -1.67
YNL040WP53960 SPO19YPL130W 672 nt4.61□□□□□ -1.67
YNL040WP53960 snR19snR19 568 nt4.61□□□□□ -1.67
YNL040WP53960 YMR111CYMR111C 1389 nt4.61□□□□□ -1.67
YNL040WP53960 ERG4YGL012W 1422 nt4.61□□□□□ -1.67
YNL040WP53960 ALD3YMR169C 1521 nt4.61□□□□□ -1.67
YNL040WP53960 ALD2YMR170C 1521 nt4.61□□□□□ -1.67
YNL040WP53960 YER145C-AYER145C-A 438 nt4.6□□□□□ -1.67
YNL040WP53960 YHR214WYHR214W 612 nt4.6□□□□□ -1.67
YNL040WP53960 YAR066WYAR066W 612 nt4.6□□□□□ -1.67
YNL040WP53960 YMR030W-AYMR030W-A 291 nt4.6□□□□□ -1.67
YNL040WP53960 URE2YNL229C 1065 nt4.6□□□□□ -1.67
YNL040WP53960 STR2YJR130C 1920 nt4.6□□□□□ -1.67
YNL040WP53960 AFT1YGL071W 2073 nt4.6□□□□□ -1.67
YNL040WP53960 SEC9YGR009C 1956 nt4.59□□□□□ -1.67
YNL040WP53960 PEX30YLR324W 1572 nt4.59□□□□□ -1.67
YNL040WP53960 RTC1YOL138C 4026 nt4.59□□□□□ -1.67
Retrieved 100 of 7,029 protein–RNA pairs in 9.7 ms