RNA–Protein interactions for RNA: YMR172W

HOT1, Transcript of Transcription factor for glycerol biosynthetic genes, yeast

Gene HOT1, Length 2,160 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HOT1	YMR172W	RQC2	Q12532	1038 aa	Known RBP	7.31	□□□□□ -1.24
HOT1	YMR172W	BFR2	Q06631	534 aa	Known RBP	7.22	□□□□□ -1.25
HOT1	YMR172W	NOP2	P40991	618 aa	Known RBP	6.63	□□□□□ -1.35
HOT1	YMR172W	CAB3	P36076	571 aa		6.53	□□□□□ -1.36
HOT1	YMR172W	URN1	Q06525	465 aa	Known RBP	6.53	□□□□□ -1.36
HOT1	YMR172W	EBP2	P36049	427 aa	Known RBP	6.52	□□□□□ -1.36
HOT1	YMR172W	TAF7	Q05021	590 aa		6.47	□□□□□ -1.37
HOT1	YMR172W	SIS2	P36024	562 aa		6.41	□□□□□ -1.38
HOT1	YMR172W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.27	□□□□□ -1.41	not detected
HOT1	YMR172W	YFR016C	P43597	1233 aa	Known RBP	6.17	□□□□□ -1.42
HOT1	YMR172W	YPR148C	Q06523	435 aa		6.16	□□□□□ -1.42
HOT1	YMR172W	AVT3	P36062	692 aa		6.14	□□□□□ -1.43
HOT1	YMR172W	RPS0B	P46654	252 aa	Known RBP	6.12	□□□□□ -1.43
HOT1	YMR172W	SKI3	P17883	1432 aa	Known RBP	6.09	□□□□□ -1.43
HOT1	YMR172W	YRB30	P53107	440 aa	Predicted RBP	6.03	□□□□□ -1.44
HOT1	YMR172W	DRS1	P32892	752 aa	Known RBP	6.01	□□□□□ -1.45
HOT1	YMR172W	MNN4	P36044	1178 aa		5.99	□□□□□ -1.45
HOT1	YMR172W	TFA1	P36100	482 aa		5.99	□□□□□ -1.45
HOT1	YMR172W	TCB2	P48231	1178 aa		5.99	□□□□□ -1.45
HOT1	YMR172W	DIP2	Q12220	943 aa	Predicted RBP	5.99	□□□□□ -1.45
HOT1	YMR172W	KRI1	P42846	591 aa	Known RBP	5.97	□□□□□ -1.45
HOT1	YMR172W	SPA2	P23201	1466 aa	Known RBP	5.95	□□□□□ -1.46
HOT1	YMR172W	CWC22	P53333	577 aa	Known RBP	5.95	□□□□□ -1.46
HOT1	YMR172W	AIM44	Q99299	758 aa		5.9	□□□□□ -1.47
HOT1	YMR172W	ENP1	P38333	483 aa	Known RBP	5.89	□□□□□ -1.47
HOT1	YMR172W	QCR6	P00127	147 aa		5.89	□□□□□ -1.47
HOT1	YMR172W	DEF1	P35732	738 aa	Known RBP	5.88	□□□□□ -1.47
HOT1	YMR172W	LEO1	P38439	464 aa		5.87	□□□□□ -1.47
HOT1	YMR172W	TCB3	Q03640	1545 aa	Known RBP	5.87	□□□□□ -1.47
HOT1	YMR172W	RLF2	Q12495	606 aa		5.84	□□□□□ -1.47
HOT1	YMR172W	RSE1	Q04693	1361 aa	Known RBP	5.83	□□□□□ -1.48
HOT1	YMR172W	NUG1	P40010	520 aa	Known RBP	5.83	□□□□□ -1.48
HOT1	YMR172W	NAP1	P25293	417 aa	Known RBP	5.82	□□□□□ -1.48
HOT1	YMR172W	NOP53	Q12080	455 aa	Known RBP	5.82	□□□□□ -1.48
HOT1	YMR172W	CLC1	P17891	233 aa		5.81	□□□□□ -1.48
HOT1	YMR172W	ENV11	P53246	860 aa		5.81	□□□□□ -1.48
HOT1	YMR172W	FPR3	P38911	411 aa	Known RBP	5.79	□□□□□ -1.48
HOT1	YMR172W	SEC3	P33332	1336 aa	Known RBP	5.78	□□□□□ -1.48
HOT1	YMR172W	PSH1	Q12161	406 aa		5.77	□□□□□ -1.49
HOT1	YMR172W	RNA1	P11745	407 aa	Known RBP	5.77	□□□□□ -1.49
HOT1	YMR172W	YGR130C	P53278	816 aa		5.77	□□□□□ -1.49
HOT1	YMR172W	SPT7	P35177	1332 aa		5.76	□□□□□ -1.49
HOT1	YMR172W	SSN2	P38931	1420 aa		5.76	□□□□□ -1.49
HOT1	YMR172W	RIX1	P38883	763 aa	Predicted RBP	5.76	□□□□□ -1.49
HOT1	YMR172W	FPR4	Q06205	392 aa	Predicted RBP	5.74	□□□□□ -1.49
HOT1	YMR172W	SPT2	P06843	333 aa	Predicted RBP	5.74	□□□□□ -1.49
HOT1	YMR172W	SGS1	P35187	1447 aa		5.74	□□□□□ -1.49
HOT1	YMR172W	FUN12	P39730	1002 aa	Known RBP	5.73	□□□□□ -1.49
HOT1	YMR172W	IOC4	Q04213	475 aa		5.73	□□□□□ -1.49
HOT1	YMR172W	HSP82	P02829	709 aa	Known RBP	5.72	□□□□□ -1.49
HOT1	YMR172W	IME2	P32581	645 aa		5.7	□□□□□ -1.5
HOT1	YMR172W	STH1	P32597	1359 aa		5.7	□□□□□ -1.5
HOT1	YMR172W	PLP2	Q12017	286 aa		5.7	□□□□□ -1.5
HOT1	YMR172W	SPT21	P35209	758 aa		5.69	□□□□□ -1.5
HOT1	YMR172W	EAF7	P53911	425 aa	Known RBP	5.69	□□□□□ -1.5
HOT1	YMR172W	RLP24	Q07915	199 aa	Known RBP	5.66	□□□□□ -1.5
HOT1	YMR172W	INO80	P53115	1489 aa		5.66	□□□□□ -1.5
HOT1	YMR172W	YTA7	P40340	1379 aa		5.66	□□□□□ -1.5
HOT1	YMR172W	SPC110	P32380	944 aa		5.65	□□□□□ -1.5
HOT1	YMR172W	NMD2	P38798	1089 aa	Known RBP	5.65	□□□□□ -1.5
HOT1	YMR172W	FAP1	P53971	965 aa		5.65	□□□□□ -1.5
HOT1	YMR172W	SAS10	Q12136	610 aa	Predicted RBP	5.63	□□□□□ -1.51
HOT1	YMR172W	PRS1	P32895	427 aa	Known RBP	5.62	□□□□□ -1.51
HOT1	YMR172W	RPN1	P38764	993 aa	Known RBP	5.62	□□□□□ -1.51
HOT1	YMR172W	POL5	P39985	1022 aa	Known RBP	5.62	□□□□□ -1.51
HOT1	YMR172W	MTC1	P47018	478 aa	Known RBP	5.61	□□□□□ -1.51
HOT1	YMR172W	PIL1	P53252	339 aa	Known RBP	5.6	□□□□□ -1.51
HOT1	YMR172W	YNL011C	P53980	444 aa		5.6	□□□□□ -1.51
HOT1	YMR172W	PAF1	P38351	445 aa		5.59	□□□□□ -1.51
HOT1	YMR172W	SNU71	P53207	620 aa	Known RBP	5.59	□□□□□ -1.52
HOT1	YMR172W	TOP1	P04786	769 aa		5.58	□□□□□ -1.52
HOT1	YMR172W	OPY1	P38271	328 aa		5.58	□□□□□ -1.52
HOT1	YMR172W	IFH1	P39520	1085 aa		5.57	□□□□□ -1.52
HOT1	YMR172W	RPS0A	P32905	252 aa	Known RBP	5.56	□□□□□ -1.52
HOT1	YMR172W	SNF7	P39929	240 aa	Known RBP	5.56	□□□□□ -1.52
HOT1	YMR172W	UFD4	P33202	1483 aa		5.56	□□□□□ -1.52
HOT1	YMR172W	VPS4	P52917	437 aa		5.56	□□□□□ -1.52
HOT1	YMR172W	MSH4	P40965	878 aa	Predicted RBP	5.55	□□□□□ -1.52
HOT1	YMR172W	SPP41	P38904	1435 aa		5.55	□□□□□ -1.52
HOT1	YMR172W	ECM5	Q03214	1411 aa		5.55	□□□□□ -1.52
HOT1	YMR172W	MMS22	Q06164	1454 aa		5.55	□□□□□ -1.52
HOT1	YMR172W	NOP58	Q12499	511 aa	Known RBP	5.55	□□□□□ -1.52
HOT1	YMR172W	CHD1	P32657	1468 aa		5.54	□□□□□ -1.52
HOT1	YMR172W	SMC3	P47037	1230 aa		5.54	□□□□□ -1.52
HOT1	YMR172W	NNF2	P53253	936 aa		5.54	□□□□□ -1.52
HOT1	YMR172W	RPC31	P17890	251 aa		5.53	□□□□□ -1.52
HOT1	YMR172W	GRX3	Q03835	250 aa		5.53	□□□□□ -1.52
HOT1	YMR172W	DOS2	P54858	310 aa		5.53	□□□□□ -1.52
HOT1	YMR172W	MDG1	P53885	366 aa		5.52	□□□□□ -1.53
HOT1	YMR172W	ETT1	Q08421	412 aa	Known RBP	5.52	□□□□□ -1.53
HOT1	YMR172W	NST1	P53935	1240 aa		5.51	□□□□□ -1.53
HOT1	YMR172W	RAD26	P40352	1085 aa		5.5	□□□□□ -1.53
HOT1	YMR172W	PRP3	Q03338	469 aa	Predicted RBP	5.5	□□□□□ -1.53
HOT1	YMR172W	YSH1	Q06224	779 aa	Predicted RBP	5.5	□□□□□ -1.53
HOT1	YMR172W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.5	□□□□□ -1.53	not detected
HOT1	YMR172W	CTR9	P89105	1077 aa		5.5	□□□□□ -1.53
HOT1	YMR172W	CFT1	Q06632	1357 aa	Known RBP	5.5	□□□□□ -1.53
HOT1	YMR172W	LTV1	P34078	463 aa		5.49	□□□□□ -1.53
HOT1	YMR172W	MSH3	P25336	1018 aa		5.49	□□□□□ -1.53
HOT1	YMR172W	TAN1	P53072	289 aa	Predicted RBP	5.49	□□□□□ -1.53

Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms