Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1P51610 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1P51610 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.91■□□□□ 0.78
HCFC1P51610 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1P51610 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
HCFC1P51610 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1P51610 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
HCFC1P51610 AC027612.3-201ENST00000413684 1047 ntBASIC19.91■□□□□ 0.78
HCFC1P51610 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HCFC1P51610 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1P51610 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
HCFC1P51610 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HCFC1P51610 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1P51610 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1P51610 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1P51610 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1P51610 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1P51610 AL022069.1-201ENST00000568025 1636 ntBASIC19.9■□□□□ 0.78
HCFC1P51610 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.9■□□□□ 0.78
HCFC1P51610 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.9■□□□□ 0.78
HCFC1P51610 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1P51610 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.9■□□□□ 0.78
HCFC1P51610 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1P51610 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1P51610 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.9■□□□□ 0.78
HCFC1P51610 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1P51610 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.9■□□□□ 0.78
HCFC1P51610 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.9■□□□□ 0.78
HCFC1P51610 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.9■□□□□ 0.78
HCFC1P51610 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.9■□□□□ 0.78
HCFC1P51610 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HCFC1P51610 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.89■□□□□ 0.77
HCFC1P51610 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.89■□□□□ 0.77
HCFC1P51610 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HCFC1P51610 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.89■□□□□ 0.77
HCFC1P51610 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1P51610 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1P51610 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HCFC1P51610 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HCFC1P51610 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1P51610 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1P51610 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1P51610 AL031602.1-201ENST00000633169 911 ntBASIC19.88■□□□□ 0.77
HCFC1P51610 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HCFC1P51610 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HCFC1P51610 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.88■□□□□ 0.77
HCFC1P51610 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.88■□□□□ 0.77
HCFC1P51610 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.88■□□□□ 0.77
HCFC1P51610 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HCFC1P51610 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.88■□□□□ 0.77
HCFC1P51610 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.88■□□□□ 0.77
HCFC1P51610 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.88■□□□□ 0.77
HCFC1P51610 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1P51610 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1P51610 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1P51610 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1P51610 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1P51610 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HCFC1P51610 RARRES2P11-201ENST00000635158 484 ntBASIC19.87■□□□□ 0.77
HCFC1P51610 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.87■□□□□ 0.77
HCFC1P51610 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.87■□□□□ 0.77
HCFC1P51610 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
HCFC1P51610 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1P51610 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.86■□□□□ 0.77
HCFC1P51610 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L2-201ENST00000561772 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L6-201ENST00000626483 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L1-201ENST00000627662 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L8-201ENST00000629013 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L3-201ENST00000630187 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L7-201ENST00000630678 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 DUX4L5-201ENST00000630834 1275 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HCFC1P51610 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HCFC1P51610 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.86■□□□□ 0.77
HCFC1P51610 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.86■□□□□ 0.77
HCFC1P51610 AC126544.1-201ENST00000580842 1059 ntBASIC19.86■□□□□ 0.77
HCFC1P51610 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.86■□□□□ 0.77
HCFC1P51610 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HCFC1P51610 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1P51610 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1P51610 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
HCFC1P51610 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.85■□□□□ 0.77
HCFC1P51610 AC012414.1-201ENST00000556676 535 ntBASIC19.85■□□□□ 0.77
HCFC1P51610 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
HCFC1P51610 DUSP8P4-201ENST00000399538 1761 ntBASIC19.85■□□□□ 0.77
HCFC1P51610 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1P51610 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1P51610 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HCFC1P51610 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms