Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.64■□□□□ 0.57
THBS3P49746 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS3P49746 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS3P49746 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS3P49746 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.64■□□□□ 0.57
THBS3P49746 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
THBS3P49746 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.64■□□□□ 0.57
THBS3P49746 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
THBS3P49746 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
THBS3P49746 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
THBS3P49746 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.63■□□□□ 0.57
THBS3P49746 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.63■□□□□ 0.57
THBS3P49746 AC103834.1-201ENST00000520383 144 ntBASIC18.63■□□□□ 0.57
THBS3P49746 MIR4508-201ENST00000584178 70 ntBASIC18.63■□□□□ 0.57
THBS3P49746 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.63■□□□□ 0.57
THBS3P49746 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.63■□□□□ 0.57
THBS3P49746 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
THBS3P49746 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
THBS3P49746 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS3P49746 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.62■□□□□ 0.57
THBS3P49746 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS3P49746 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS3P49746 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
THBS3P49746 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.62■□□□□ 0.57
THBS3P49746 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.62■□□□□ 0.57
THBS3P49746 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS3P49746 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.62■□□□□ 0.57
THBS3P49746 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
THBS3P49746 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
THBS3P49746 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.61■□□□□ 0.57
THBS3P49746 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.61■□□□□ 0.57
THBS3P49746 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.61■□□□□ 0.57
THBS3P49746 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
THBS3P49746 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
THBS3P49746 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS3P49746 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS3P49746 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
THBS3P49746 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
THBS3P49746 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.59■□□□□ 0.57
THBS3P49746 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
THBS3P49746 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.59■□□□□ 0.57
THBS3P49746 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS3P49746 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
THBS3P49746 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS3P49746 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.59■□□□□ 0.57
THBS3P49746 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
THBS3P49746 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
THBS3P49746 AC012676.1-201ENST00000574705 1949 ntBASIC18.59■□□□□ 0.57
THBS3P49746 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THBS3P49746 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
THBS3P49746 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THBS3P49746 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THBS3P49746 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
THBS3P49746 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.58■□□□□ 0.57
THBS3P49746 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
THBS3P49746 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.58■□□□□ 0.56
THBS3P49746 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.58■□□□□ 0.56
THBS3P49746 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC18.58■□□□□ 0.56
THBS3P49746 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.58■□□□□ 0.56
THBS3P49746 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
THBS3P49746 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms