Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CBX5P45973 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX5P45973 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.4■□□□□ 0.7
CBX5P45973 AC233723.2-201ENST00000623798 2106 ntBASIC19.4■□□□□ 0.7
CBX5P45973 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.4■□□□□ 0.7
CBX5P45973 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.4■□□□□ 0.7
CBX5P45973 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CBX5P45973 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CBX5P45973 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CBX5P45973 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CBX5P45973 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CBX5P45973 AC092068.2-201ENST00000590491 1708 ntBASIC19.39■□□□□ 0.69
CBX5P45973 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX5P45973 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CBX5P45973 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.39■□□□□ 0.69
CBX5P45973 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.38■□□□□ 0.69
CBX5P45973 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.38■□□□□ 0.69
CBX5P45973 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CBX5P45973 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CBX5P45973 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.38■□□□□ 0.69
CBX5P45973 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX5P45973 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CBX5P45973 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.37■□□□□ 0.69
CBX5P45973 DUSP8P3-201ENST00000399571 1760 ntBASIC19.37■□□□□ 0.69
CBX5P45973 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.37■□□□□ 0.69
CBX5P45973 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CBX5P45973 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CBX5P45973 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CBX5P45973 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CBX5P45973 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CBX5P45973 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX5P45973 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CBX5P45973 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.36■□□□□ 0.69
CBX5P45973 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.36■□□□□ 0.69
CBX5P45973 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CBX5P45973 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CBX5P45973 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.35■□□□□ 0.69
CBX5P45973 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CBX5P45973 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX5P45973 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.35■□□□□ 0.69
CBX5P45973 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CBX5P45973 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CBX5P45973 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.34■□□□□ 0.69
CBX5P45973 ABHD17AP4-201ENST00000411545 909 ntBASIC19.34■□□□□ 0.69
CBX5P45973 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CBX5P45973 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CBX5P45973 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CBX5P45973 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX5P45973 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.33■□□□□ 0.69
CBX5P45973 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX5P45973 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CBX5P45973 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX5P45973 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CBX5P45973 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CBX5P45973 AC007029.1-201ENST00000604183 313 ntBASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms