Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
KRT20P35900 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.4■■□□□ 1.02
KRT20P35900 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT20P35900 BX664725.1-201ENST00000438252 379 ntBASIC21.4■■□□□ 1.02
KRT20P35900 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.4■■□□□ 1.02
KRT20P35900 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
KRT20P35900 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT20P35900 HLA-L-211ENST00000482052 1765 ntBASIC21.4■■□□□ 1.02
KRT20P35900 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
KRT20P35900 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
KRT20P35900 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT20P35900 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.39■■□□□ 1.01
KRT20P35900 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT20P35900 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT20P35900 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT20P35900 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
KRT20P35900 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.39■■□□□ 1.01
KRT20P35900 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT20P35900 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT20P35900 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT20P35900 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.39■■□□□ 1.01
KRT20P35900 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.38■■□□□ 1.01
KRT20P35900 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.38■■□□□ 1.01
KRT20P35900 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
KRT20P35900 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT20P35900 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
KRT20P35900 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.38■■□□□ 1.01
KRT20P35900 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
KRT20P35900 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
KRT20P35900 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
KRT20P35900 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
KRT20P35900 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.37■■□□□ 1.01
KRT20P35900 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
KRT20P35900 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.37■■□□□ 1.01
KRT20P35900 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.37■■□□□ 1.01
KRT20P35900 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
KRT20P35900 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT20P35900 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.37■■□□□ 1.01
KRT20P35900 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.36■■□□□ 1.01
KRT20P35900 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
KRT20P35900 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT20P35900 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
KRT20P35900 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT20P35900 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.36■■□□□ 1.01
KRT20P35900 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.36■■□□□ 1.01
KRT20P35900 KRT125P-201ENST00000546827 989 ntBASIC21.36■■□□□ 1.01
KRT20P35900 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT20P35900 AL451085.2-201ENST00000605085 799 ntBASIC21.36■■□□□ 1.01
KRT20P35900 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
KRT20P35900 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
KRT20P35900 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
KRT20P35900 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 AC137630.3-201ENST00000607245 391 ntBASIC21.35■■□□□ 1.01
KRT20P35900 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.35■■□□□ 1.01
KRT20P35900 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
KRT20P35900 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.34■■□□□ 1.01
KRT20P35900 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT20P35900 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
KRT20P35900 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
KRT20P35900 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT20P35900 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
KRT20P35900 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.34■■□□□ 1.01
KRT20P35900 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
KRT20P35900 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT20P35900 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
KRT20P35900 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.33■■□□□ 1.01
KRT20P35900 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.33■■□□□ 1.01
KRT20P35900 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
KRT20P35900 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
KRT20P35900 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.33■■□□□ 1.01
KRT20P35900 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.33■■□□□ 1.01
KRT20P35900 AC009299.2-201ENST00000482477 511 ntBASIC21.33■■□□□ 1.01
KRT20P35900 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
KRT20P35900 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
KRT20P35900 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
KRT20P35900 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT20P35900 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT20P35900 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
KRT20P35900 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.32■■□□□ 1
KRT20P35900 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.32■■□□□ 1
KRT20P35900 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.32■■□□□ 1
KRT20P35900 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.32■■□□□ 1
KRT20P35900 AL022069.1-201ENST00000568025 1636 ntBASIC21.32■■□□□ 1
KRT20P35900 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT20P35900 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KRT20P35900 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
KRT20P35900 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.31■■□□□ 1
KRT20P35900 AF131216.4-201ENST00000638924 1588 ntBASIC21.31■■□□□ 1
KRT20P35900 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
KRT20P35900 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms