Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NF1P21359 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NF1P21359 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.72■□□□□ 0.59
NF1P21359 FAM201B-201ENST00000458407 597 ntBASIC18.72■□□□□ 0.59
NF1P21359 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NF1P21359 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.71■□□□□ 0.59
NF1P21359 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.71■□□□□ 0.59
NF1P21359 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NF1P21359 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NF1P21359 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
NF1P21359 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
NF1P21359 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NF1P21359 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NF1P21359 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.7■□□□□ 0.58
NF1P21359 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NF1P21359 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.69■□□□□ 0.58
NF1P21359 GPX1P1-201ENST00000388829 606 ntBASIC18.69■□□□□ 0.58
NF1P21359 AC006455.2-201ENST00000429931 906 ntBASIC18.69■□□□□ 0.58
NF1P21359 AC069152.1-201ENST00000438030 544 ntBASIC18.69■□□□□ 0.58
NF1P21359 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.69■□□□□ 0.58
NF1P21359 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.69■□□□□ 0.58
NF1P21359 TPRG1LP1-201ENST00000598702 760 ntBASIC18.69■□□□□ 0.58
NF1P21359 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NF1P21359 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
NF1P21359 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NF1P21359 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NF1P21359 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
NF1P21359 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.69■□□□□ 0.58
NF1P21359 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NF1P21359 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NF1P21359 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.69■□□□□ 0.58
NF1P21359 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.69■□□□□ 0.58
NF1P21359 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.68■□□□□ 0.58
NF1P21359 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.68■□□□□ 0.58
NF1P21359 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.68■□□□□ 0.58
NF1P21359 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
NF1P21359 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.68■□□□□ 0.58
NF1P21359 AL138781.1-201ENST00000566567 1274 ntBASIC18.68■□□□□ 0.58
NF1P21359 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NF1P21359 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NF1P21359 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.67■□□□□ 0.58
NF1P21359 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NF1P21359 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.67■□□□□ 0.58
NF1P21359 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.67■□□□□ 0.58
NF1P21359 SMUG1P1-201ENST00000590640 811 ntBASIC18.67■□□□□ 0.58
NF1P21359 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.67■□□□□ 0.58
NF1P21359 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NF1P21359 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NF1P21359 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.67■□□□□ 0.58
NF1P21359 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.67■□□□□ 0.58
NF1P21359 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.67■□□□□ 0.58
NF1P21359 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NF1P21359 SHF-206ENST00000560471 2499 ntTSL 5 BASIC18.67■□□□□ 0.58
NF1P21359 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.66■□□□□ 0.58
NF1P21359 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NF1P21359 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.66■□□□□ 0.58
NF1P21359 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.66■□□□□ 0.58
NF1P21359 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.66■□□□□ 0.58
NF1P21359 RPS2P52-201ENST00000469610 820 ntBASIC18.66■□□□□ 0.58
NF1P21359 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.66■□□□□ 0.58
NF1P21359 FOXO3B-201ENST00000395675 1928 ntBASIC18.66■□□□□ 0.58
NF1P21359 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NF1P21359 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NF1P21359 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NF1P21359 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.66■□□□□ 0.58
NF1P21359 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.66■□□□□ 0.58
NF1P21359 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NF1P21359 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NF1P21359 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NF1P21359 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NF1P21359 AL354811.1-201ENST00000610286 706 ntBASIC18.65■□□□□ 0.58
NF1P21359 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NF1P21359 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NF1P21359 AC009102.2-201ENST00000606772 1639 ntBASIC18.65■□□□□ 0.58
NF1P21359 AP004609.3-201ENST00000610705 1884 ntBASIC18.65■□□□□ 0.58
NF1P21359 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NF1P21359 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NF1P21359 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NF1P21359 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.64■□□□□ 0.58
NF1P21359 MIR1224-201ENST00000408193 85 ntBASIC18.64■□□□□ 0.58
NF1P21359 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.64■□□□□ 0.58
NF1P21359 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NF1P21359 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.64■□□□□ 0.57
NF1P21359 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NF1P21359 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.64■□□□□ 0.57
NF1P21359 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.64■□□□□ 0.57
NF1P21359 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NF1P21359 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms