Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB3BP20337 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB3BP20337 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB3BP20337 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RAB3BP20337 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB3BP20337 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3BP20337 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3BP20337 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RAB3BP20337 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3BP20337 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB3BP20337 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB3BP20337 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB3BP20337 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB3BP20337 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.83■□□□□ 0.77
RAB3BP20337 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB3BP20337 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
RAB3BP20337 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB3BP20337 ECEL1P2-201ENST00000461596 1295 ntBASIC19.83■□□□□ 0.77
RAB3BP20337 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB3BP20337 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB3BP20337 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAB3BP20337 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RAB3BP20337 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.82■□□□□ 0.76
RAB3BP20337 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAB3BP20337 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB3BP20337 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB3BP20337 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3BP20337 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RAB3BP20337 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
RAB3BP20337 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB3BP20337 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.8■□□□□ 0.76
RAB3BP20337 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
RAB3BP20337 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3BP20337 AC016575.1-201ENST00000607026 382 ntBASIC19.8■□□□□ 0.76
RAB3BP20337 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.8■□□□□ 0.76
RAB3BP20337 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB3BP20337 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3BP20337 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3BP20337 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB3BP20337 AC242852.2-201ENST00000615738 1807 ntBASIC19.79■□□□□ 0.76
RAB3BP20337 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB3BP20337 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RAB3BP20337 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB3BP20337 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RAB3BP20337 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.79■□□□□ 0.76
RAB3BP20337 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB3BP20337 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RAB3BP20337 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3BP20337 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.79■□□□□ 0.76
RAB3BP20337 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3BP20337 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 AC007375.3-201ENST00000600936 2314 ntBASIC19.78■□□□□ 0.76
RAB3BP20337 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RAB3BP20337 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 AC090877.2-201ENST00000558441 1738 ntBASIC19.78■□□□□ 0.76
RAB3BP20337 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RAB3BP20337 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB3BP20337 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB3BP20337 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
RAB3BP20337 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
RAB3BP20337 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3BP20337 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3BP20337 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.77■□□□□ 0.76
RAB3BP20337 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB3BP20337 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RAB3BP20337 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms