Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
SNCGO76070 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNCGO76070 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCGO76070 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
SNCGO76070 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SNCGO76070 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
SNCGO76070 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SNCGO76070 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
SNCGO76070 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SNCGO76070 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC15.32■□□□□ 0.04
SNCGO76070 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCGO76070 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SNCGO76070 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
SNCGO76070 LINC01124-201ENST00000409786 2117 ntBASIC15.31■□□□□ 0.04
SNCGO76070 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SNCGO76070 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC15.3■□□□□ 0.04
SNCGO76070 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNCGO76070 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SNCGO76070 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNCGO76070 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC15.29■□□□□ 0.04
SNCGO76070 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC15.29■□□□□ 0.04
SNCGO76070 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC15.29■□□□□ 0.04
SNCGO76070 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SNCGO76070 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC15.29■□□□□ 0.04
SNCGO76070 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNCGO76070 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNCGO76070 AC135983.2-203ENST00000454486 1613 ntBASIC15.28■□□□□ 0.04
SNCGO76070 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.28■□□□□ 0.04
SNCGO76070 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SNCGO76070 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNCGO76070 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 AC007375.3-201ENST00000600936 2314 ntBASIC15.28■□□□□ 0.04
SNCGO76070 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.28■□□□□ 0.04
SNCGO76070 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNCGO76070 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCGO76070 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SNCGO76070 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCGO76070 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCGO76070 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC15.27■□□□□ 0.04
SNCGO76070 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCGO76070 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCGO76070 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCGO76070 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCGO76070 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCGO76070 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.27■□□□□ 0.03
SNCGO76070 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCGO76070 AC141586.4-201ENST00000624558 1573 ntBASIC15.27■□□□□ 0.03
SNCGO76070 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCGO76070 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCGO76070 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCGO76070 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC15.27■□□□□ 0.03
SNCGO76070 PKD1P5-201ENST00000532415 10291 ntBASIC15.27■□□□□ 0.03
SNCGO76070 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC15.27■□□□□ 0.03
SNCGO76070 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.26■□□□□ 0.03
SNCGO76070 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms