Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC28A2O43868 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC28A2O43868 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC28A2O43868 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.74■■□□□ 1.07
SLC28A2O43868 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC28A2O43868 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SLC28A2O43868 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC28A2O43868 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC28A2O43868 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC28A2O43868 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SLC28A2O43868 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC28A2O43868 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC28A2O43868 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC28A2O43868 AL355001.2-201ENST00000620617 1191 ntBASIC21.73■■□□□ 1.07
SLC28A2O43868 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC28A2O43868 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SLC28A2O43868 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC28A2O43868 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.72■■□□□ 1.07
SLC28A2O43868 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SLC28A2O43868 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC28A2O43868 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC28A2O43868 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SLC28A2O43868 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC28A2O43868 EDA-201ENST00000338901 1233 ntBASIC21.71■■□□□ 1.07
SLC28A2O43868 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC28A2O43868 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC28A2O43868 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC28A2O43868 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.71■■□□□ 1.07
SLC28A2O43868 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
SLC28A2O43868 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
SLC28A2O43868 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC28A2O43868 AC004812.2-201ENST00000611079 2094 ntBASIC21.7■■□□□ 1.06
SLC28A2O43868 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SLC28A2O43868 AC097381.1-201ENST00000429019 1296 ntBASIC21.7■■□□□ 1.06
SLC28A2O43868 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.7■■□□□ 1.06
SLC28A2O43868 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC28A2O43868 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SLC28A2O43868 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC28A2O43868 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC28A2O43868 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.7■■□□□ 1.06
SLC28A2O43868 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC28A2O43868 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC28A2O43868 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC28A2O43868 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC28A2O43868 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.69■■□□□ 1.06
SLC28A2O43868 AC090192.1-201ENST00000517740 490 ntBASIC21.69■■□□□ 1.06
SLC28A2O43868 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.69■■□□□ 1.06
SLC28A2O43868 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC28A2O43868 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC28A2O43868 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.68■■□□□ 1.06
SLC28A2O43868 AC087623.3-201ENST00000607047 1098 ntBASIC21.68■■□□□ 1.06
SLC28A2O43868 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC28A2O43868 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC28A2O43868 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC28A2O43868 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC28A2O43868 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.67■■□□□ 1.06
SLC28A2O43868 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SLC28A2O43868 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SLC28A2O43868 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.67■■□□□ 1.06
SLC28A2O43868 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.67■■□□□ 1.06
SLC28A2O43868 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC28A2O43868 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC28A2O43868 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC28A2O43868 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC28A2O43868 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC28A2O43868 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC28A2O43868 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC28A2O43868 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SLC28A2O43868 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.66■■□□□ 1.06
SLC28A2O43868 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC28A2O43868 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC28A2O43868 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC28A2O43868 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLC28A2O43868 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC28A2O43868 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC28A2O43868 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC28A2O43868 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.65■■□□□ 1.06
SLC28A2O43868 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
SLC28A2O43868 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC28A2O43868 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC28A2O43868 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC28A2O43868 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms