Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RTL8CO15255 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTL8CO15255 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RTL8CO15255 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RTL8CO15255 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RTL8CO15255 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTL8CO15255 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC15.18■□□□□ 0.02
RTL8CO15255 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC15.18■□□□□ 0.02
RTL8CO15255 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RTL8CO15255 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RTL8CO15255 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.17■□□□□ 0.02
RTL8CO15255 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.17■□□□□ 0.02
RTL8CO15255 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.17■□□□□ 0.02
RTL8CO15255 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RTL8CO15255 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC15.17■□□□□ 0.02
RTL8CO15255 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 AC126544.1-201ENST00000580842 1059 ntBASIC15.17■□□□□ 0.02
RTL8CO15255 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.17■□□□□ 0.02
RTL8CO15255 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RTL8CO15255 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RTL8CO15255 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC15.17■□□□□ 0.02
RTL8CO15255 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RTL8CO15255 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.16■□□□□ 0.02
RTL8CO15255 NME4-202ENST00000382940 766 ntTSL 3 BASIC15.16■□□□□ 0.02
RTL8CO15255 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.16■□□□□ 0.02
RTL8CO15255 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.16■□□□□ 0.02
RTL8CO15255 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC15.16■□□□□ 0.02
RTL8CO15255 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.16■□□□□ 0.02
RTL8CO15255 NME4-211ENST00000620944 1193 ntTSL 2 BASIC15.16■□□□□ 0.02
RTL8CO15255 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.16■□□□□ 0.02
RTL8CO15255 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RTL8CO15255 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RTL8CO15255 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC15.16■□□□□ 0.02
RTL8CO15255 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.16■□□□□ 0.02
RTL8CO15255 TSPY26P-201ENST00000476365 1326 ntBASIC15.16■□□□□ 0.02
RTL8CO15255 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RTL8CO15255 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTL8CO15255 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.15■□□□□ 0.02
RTL8CO15255 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.15■□□□□ 0.02
RTL8CO15255 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RTL8CO15255 AC004911.1-201ENST00000416316 871 ntBASIC15.15■□□□□ 0.02
RTL8CO15255 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTL8CO15255 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.15■□□□□ 0.02
RTL8CO15255 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.15■□□□□ 0.02
RTL8CO15255 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.15■□□□□ 0.02
RTL8CO15255 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.15■□□□□ 0.02
RTL8CO15255 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTL8CO15255 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTL8CO15255 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC15.14■□□□□ 0.01
RTL8CO15255 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 AL022069.1-201ENST00000568025 1636 ntBASIC15.14■□□□□ 0.01
RTL8CO15255 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTL8CO15255 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.14■□□□□ 0.01
RTL8CO15255 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
RTL8CO15255 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
RTL8CO15255 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.14■□□□□ 0.01
RTL8CO15255 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC15.14■□□□□ 0.01
RTL8CO15255 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RTL8CO15255 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 VGF-203ENST00000611537 1622 ntTSL 5 BASIC15.14■□□□□ 0.01
RTL8CO15255 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC15.13■□□□□ 0.01
RTL8CO15255 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RTL8CO15255 ID1-201ENST00000376105 1233 ntBASIC15.13■□□□□ 0.01
RTL8CO15255 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.13■□□□□ 0.01
RTL8CO15255 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RTL8CO15255 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.13■□□□□ 0.01
RTL8CO15255 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTL8CO15255 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms