Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NPC1O15118 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPC1O15118 AC027682.1-201ENST00000562846 899 ntBASIC23.03■■□□□ 1.28
NPC1O15118 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.03■■□□□ 1.28
NPC1O15118 RASA4CP-201ENST00000424092 1398 ntBASIC23.02■■□□□ 1.28
NPC1O15118 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.02■■□□□ 1.28
NPC1O15118 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 AC022211.4-201ENST00000625094 2161 ntBASIC23.02■■□□□ 1.28
NPC1O15118 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.02■■□□□ 1.28
NPC1O15118 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NPC1O15118 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
NPC1O15118 AC136469.2-201ENST00000623944 1028 ntBASIC23.02■■□□□ 1.28
NPC1O15118 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPC1O15118 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
NPC1O15118 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.02■■□□□ 1.28
NPC1O15118 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.01■■□□□ 1.27
NPC1O15118 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.01■■□□□ 1.27
NPC1O15118 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPC1O15118 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.01■■□□□ 1.27
NPC1O15118 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.01■■□□□ 1.27
NPC1O15118 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.01■■□□□ 1.27
NPC1O15118 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23■■□□□ 1.27
NPC1O15118 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23■■□□□ 1.27
NPC1O15118 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 AC105265.2-201ENST00000467189 838 ntBASIC23■■□□□ 1.27
NPC1O15118 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
NPC1O15118 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPC1O15118 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
NPC1O15118 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPC1O15118 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPC1O15118 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.99■■□□□ 1.27
NPC1O15118 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
NPC1O15118 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NPC1O15118 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.99■■□□□ 1.27
NPC1O15118 AC009086.3-201ENST00000623486 1008 ntBASIC22.99■■□□□ 1.27
NPC1O15118 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.98■■□□□ 1.27
NPC1O15118 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.98■■□□□ 1.27
NPC1O15118 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.98■■□□□ 1.27
NPC1O15118 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.98■■□□□ 1.27
NPC1O15118 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.98■■□□□ 1.27
NPC1O15118 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.98■■□□□ 1.27
NPC1O15118 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPC1O15118 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPC1O15118 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.97■■□□□ 1.27
NPC1O15118 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPC1O15118 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NPC1O15118 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPC1O15118 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NPC1O15118 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.97■■□□□ 1.27
NPC1O15118 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.97■■□□□ 1.27
NPC1O15118 RARRES2P6-201ENST00000567333 442 ntBASIC22.97■■□□□ 1.27
NPC1O15118 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NPC1O15118 CA15P2-201ENST00000611168 834 ntBASIC22.97■■□□□ 1.27
NPC1O15118 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.97■■□□□ 1.27
NPC1O15118 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.97■■□□□ 1.27
NPC1O15118 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPC1O15118 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPC1O15118 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.96■■□□□ 1.27
NPC1O15118 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPC1O15118 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPC1O15118 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
NPC1O15118 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
NPC1O15118 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.95■■□□□ 1.27
NPC1O15118 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPC1O15118 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPC1O15118 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.95■■□□□ 1.26
NPC1O15118 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.95■■□□□ 1.26
NPC1O15118 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
NPC1O15118 MIR3181-201ENST00000578512 73 ntBASIC22.95■■□□□ 1.26
NPC1O15118 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.95■■□□□ 1.26
NPC1O15118 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.95■■□□□ 1.26
NPC1O15118 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
NPC1O15118 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.94■■□□□ 1.26
NPC1O15118 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.94■■□□□ 1.26
NPC1O15118 AC142381.3-201ENST00000568208 1670 ntBASIC22.94■■□□□ 1.26
NPC1O15118 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.94■■□□□ 1.26
NPC1O15118 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
NPC1O15118 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.94■■□□□ 1.26
NPC1O15118 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms