Protein–RNA interactions for Protein: A0A0J9YXQ4

PNMA6E, Paraneoplastic antigen Ma6E, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6EA0A0J9YXQ4 RASSF1-AS1-201ENST00000629828 790 ntBASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6EA0A0J9YXQ4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA6EA0A0J9YXQ4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.29■■■□□ 2.12
PNMA6EA0A0J9YXQ4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA6EA0A0J9YXQ4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA6EA0A0J9YXQ4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AC131212.1-201ENST00000613771 668 ntBASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6EA0A0J9YXQ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
PNMA6EA0A0J9YXQ4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.26■■■□□ 2.12
PNMA6EA0A0J9YXQ4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.26■■■□□ 2.11
PNMA6EA0A0J9YXQ4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6EA0A0J9YXQ4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AL512631.2-201ENST00000604634 923 ntBASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6EA0A0J9YXQ4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 AL356740.2-201ENST00000601559 647 ntBASIC28.21■■■□□ 2.11
PNMA6EA0A0J9YXQ4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PNMA6EA0A0J9YXQ4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PNMA6EA0A0J9YXQ4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
PNMA6EA0A0J9YXQ4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 AC009102.2-201ENST00000606772 1639 ntBASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.2■■■□□ 2.1
PNMA6EA0A0J9YXQ4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC28.19■■■□□ 2.1
PNMA6EA0A0J9YXQ4 AC131281.2-201ENST00000520478 145 ntBASIC28.19■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms