Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TRAV3A0A0B4J244 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 AC079834.2-201ENST00000609776 1949 ntBASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 C1orf229-201ENST00000623686 2258 ntBASIC18.24■□□□□ 0.51
TRAV3A0A0B4J244 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRAV3A0A0B4J244 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 AC010980.1-201ENST00000587192 1142 ntBASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRAV3A0A0B4J244 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 AC233723.2-201ENST00000623798 2106 ntBASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 AF131216.4-201ENST00000638924 1588 ntBASIC18.21■□□□□ 0.51
TRAV3A0A0B4J244 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV3A0A0B4J244 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV3A0A0B4J244 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV3A0A0B4J244 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRAV3A0A0B4J244 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAV3A0A0B4J244 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 MIR4281-201ENST00000580852 62 ntBASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAV3A0A0B4J244 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 AL117328.2-201ENST00000624617 1940 ntBASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAV3A0A0B4J244 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms