Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 TSPY13P-201ENST00000338964 914 ntBASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 AC010980.1-201ENST00000587192 1142 ntBASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 AC074183.2-201ENST00000623112 922 ntBASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-2A0A0B4J237 ALDH1A3-203ENST00000557963 1670 ntBASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 AC092068.2-201ENST00000590491 1708 ntBASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-2A0A0B4J237 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 KRT18P24-201ENST00000344739 1156 ntBASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-2A0A0B4J237 AF131216.4-201ENST00000638924 1588 ntBASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 MIR4281-201ENST00000580852 62 ntBASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV8-2A0A0B4J237 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 THA1P-201ENST00000590384 1145 ntBASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 DUSP8P3-201ENST00000399571 1760 ntBASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV8-2A0A0B4J237 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-2A0A0B4J237 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRAV8-2A0A0B4J237 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms