Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
COL20A1Q9P218 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL20A1Q9P218 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.24■□□□□ 0.19
COL20A1Q9P218 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL20A1Q9P218 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC16.24■□□□□ 0.19
COL20A1Q9P218 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL20A1Q9P218 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL20A1Q9P218 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.24■□□□□ 0.19
COL20A1Q9P218 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 LDHBP1-201ENST00000455730 1119 ntBASIC16.23■□□□□ 0.19
COL20A1Q9P218 AC005740.1-201ENST00000515639 522 ntBASIC16.23■□□□□ 0.19
COL20A1Q9P218 AL031713.1-201ENST00000564813 661 ntBASIC16.23■□□□□ 0.19
COL20A1Q9P218 NDUFB10P1-201ENST00000567319 521 ntBASIC16.23■□□□□ 0.19
COL20A1Q9P218 AL133467.4-201ENST00000602953 725 ntBASIC16.23■□□□□ 0.19
COL20A1Q9P218 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
COL20A1Q9P218 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.23■□□□□ 0.19
COL20A1Q9P218 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 DNM1P30-201ENST00000563586 452 ntBASIC16.22■□□□□ 0.19
COL20A1Q9P218 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 AC139749.1-202ENST00000617529 3139 ntBASIC16.22■□□□□ 0.19
COL20A1Q9P218 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 AC007952.5-201ENST00000572818 1486 ntBASIC16.22■□□□□ 0.19
COL20A1Q9P218 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.22■□□□□ 0.19
COL20A1Q9P218 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
COL20A1Q9P218 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 AC006372.4-201ENST00000624122 1543 ntBASIC16.21■□□□□ 0.19
COL20A1Q9P218 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 HLA-DMA-203ENST00000395305 777 ntBASIC16.21■□□□□ 0.19
COL20A1Q9P218 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
COL20A1Q9P218 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 AL512306.1-201ENST00000432698 848 ntBASIC16.21■□□□□ 0.19
COL20A1Q9P218 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 AC253536.4-201ENST00000440539 267 ntBASIC16.21■□□□□ 0.19
COL20A1Q9P218 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.21■□□□□ 0.19
COL20A1Q9P218 AL512310.5-201ENST00000551999 515 ntBASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.4 ms