Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
THUMPD1Q9NXG2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TUBB8P4-201ENST00000511806 1324 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC064801.2-201ENST00000625052 1303 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 CD8B2-202ENST00000417670 633 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC002472.2-201ENST00000442739 958 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TERF1P3-201ENST00000505638 1227 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TDH-203ENST00000531764 1110 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 MIR5189-201ENST00000577370 114 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AC090643.2-201ENST00000623442 2029 ntBASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.72□□□□□ -0.21
THUMPD1Q9NXG2 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
THUMPD1Q9NXG2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms