Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 DDX6-202ENST00000526070 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF304-203ENST00000443917 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ARHGEF9-221ENST00000635967 2179 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 RBAK-201ENST00000353796 4125 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 KLHL3-201ENST00000309755 6806 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 POLR3H-203ENST00000396504 4176 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC073578.3-201ENST00000624926 4191 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PDE1B-203ENST00000538346 1711 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF8-201ENST00000621650 9128 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 HRC-203ENST00000595625 2044 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 MMP23A-201ENST00000234610 1017 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TSPY13P-201ENST00000338964 914 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SAPCD2P2-201ENST00000431719 1174 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC239859.2-201ENST00000444165 318 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC091390.4-202ENST00000476426 537 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 MIR3621-201ENST00000580529 85 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 MPDU1-223ENST00000582151 728 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC010240.3-201ENST00000607688 395 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 RHBDF2-201ENST00000313080 3582 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AK2-215ENST00000629371 3576 ntTSL 3 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF106-203ENST00000565380 5677 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ARHGAP27-202ENST00000376922 3628 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC019294.1-202ENST00000566174 2071 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 COX19-201ENST00000344111 3666 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 RBM7-203ENST00000540163 4243 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC097374.2-201ENST00000618617 1306 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC027682.7-201ENST00000623147 2121 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SEC61A1-202ENST00000424880 3238 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AC139099.1-202ENST00000574098 2409 ntBASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 MBP-211ENST00000397875 2168 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CSNK1G1-207ENST00000634654 2485 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CNR2-201ENST00000374472 5254 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ANAPC7-201ENST00000450008 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ST3GAL1-207ENST00000521180 6951 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CDC42SE1Q9NRR8 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 KRT8P31-201ENST00000504812 1408 ntBASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 MIP-201ENST00000257979 2599 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 NUPR1-201ENST00000324873 5491 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TCP11L1-202ENST00000432887 2633 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 SIDT2-220ENST00000628876 2609 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 WDR36-203ENST00000506538 7048 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 ARHGEF2-203ENST00000361247 4149 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CDC42SE1Q9NRR8 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms