Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.2□□□□□ -0.46
CCL13Q99616 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CCL13Q99616 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.2□□□□□ -0.46
CCL13Q99616 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.2□□□□□ -0.46
CCL13Q99616 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CCL13Q99616 SNX18-202ENST00000343017 3140 ntBASIC12.2□□□□□ -0.46
CCL13Q99616 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CCL13Q99616 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.19□□□□□ -0.46
CCL13Q99616 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 SMS-201ENST00000379404 1174 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL13Q99616 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL13Q99616 RPL18P13-201ENST00000478088 569 ntBASIC12.19□□□□□ -0.46
CCL13Q99616 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC12.19□□□□□ -0.46
CCL13Q99616 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.19□□□□□ -0.46
CCL13Q99616 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 AC018735.1-201ENST00000437208 1502 ntBASIC12.19□□□□□ -0.46
CCL13Q99616 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.19□□□□□ -0.46
CCL13Q99616 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 MBLAC2-202ENST00000514906 1936 ntBASIC12.19□□□□□ -0.46
CCL13Q99616 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CCL13Q99616 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CCL13Q99616 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CCL13Q99616 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.18□□□□□ -0.46
CCL13Q99616 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 AC004899.1-201ENST00000424687 1714 ntBASIC12.18□□□□□ -0.46
CCL13Q99616 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.18□□□□□ -0.46
CCL13Q99616 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CCL13Q99616 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC12.18□□□□□ -0.46
CCL13Q99616 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.18□□□□□ -0.46
CCL13Q99616 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms