Protein–RNA interactions for Protein: Q96MU7

YTHDC1, YTH domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1Q96MU7 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC20.15■□□□□ 0.82
YTHDC1Q96MU7 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 SAP30BP-225ENST00000584667 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
YTHDC1Q96MU7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 AC093525.8-201ENST00000624099 1342 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 MIR940-201ENST00000401276 94 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 SERBP1P3-201ENST00000459980 809 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 AC000095.1-201ENST00000603208 874 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 CCDC187-204ENST00000624277 3918 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 AP003969.2-201ENST00000623739 2275 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 AL445250.1-201ENST00000641671 2259 ntBASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 SNX1-201ENST00000261889 3373 ntTSL 2 BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
YTHDC1Q96MU7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 AC004623.1-201ENST00000624592 2127 ntBASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC20.13■□□□□ 0.81
YTHDC1Q96MU7 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 KCNMA1-208ENST00000372440 3849 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 KCNMA1-233ENST00000638351 3849 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
YTHDC1Q96MU7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms