Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRC46Q96FV0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 KRTAP19-9P-201ENST00000421795 191 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 GHSR-202ENST00000427970 912 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 HIST2H2BB-201ENST00000449108 381 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AC100827.2-201ENST00000563214 1194 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AC138627.1-207ENST00000641560 1006 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AC087481.3-201ENST00000602886 1894 ntBASIC13.23□□□□□ -0.29
LRRC46Q96FV0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LRRC46Q96FV0 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RN7SL769P-201ENST00000469386 295 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 DUX4L47-201ENST00000566374 394 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 MIR3619-201ENST00000579667 83 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AL021578.1-201ENST00000613646 709 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 AL136301.1-201ENST00000615830 422 ntBASIC13.22□□□□□ -0.29
LRRC46Q96FV0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRRC46Q96FV0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms