Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 AL162727.3-201ENST00000635661 2787 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 OR10N1P-201ENST00000392758 869 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 HNRNPA1P2-207ENST00000432375 960 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 AC092903.1-201ENST00000466506 262 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 SEPHS2P1-201ENST00000511618 1162 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 IGHEP1-201ENST00000521393 651 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 FLJ16779-201ENST00000612722 7638 ntBASIC14.23□□□□□ -0.13
CLDN23Q96B33 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLDN23Q96B33 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLDN23Q96B33 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 TBC1D27-202ENST00000424239 1573 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 DAD1-201ENST00000250498 731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ABCD1P4-201ENST00000399687 604 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 PGAM1P11-201ENST00000416729 680 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 LINP1-201ENST00000417112 917 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC004522.1-201ENST00000419978 654 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC104961.1-201ENST00000427605 771 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC092896.1-201ENST00000465850 380 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 MYADML-201ENST00000474610 2147 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 BAK1P2-201ENST00000532665 631 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC132825.4-202ENST00000578792 434 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC011462.4-201ENST00000616866 449 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 KRT8P43-201ENST00000406052 1458 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC007952.5-201ENST00000572818 1486 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 AC117503.4-201ENST00000623229 1418 ntBASIC14.22□□□□□ -0.13
CLDN23Q96B33 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CLDN23Q96B33 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLDN23Q96B33 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms