Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
BEST4Q8NFU0 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
BEST4Q8NFU0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 HSPA8P5-201ENST00000456928 2069 ntBASIC12.63□□□□□ -0.39
BEST4Q8NFU0 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AC022400.8-201ENST00000623453 3599 ntBASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TIMM17BP1-201ENST00000545713 516 ntBASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TEX28P1-201ENST00000613479 1221 ntBASIC12.63□□□□□ -0.39
BEST4Q8NFU0 TEX28P2-201ENST00000617764 1221 ntBASIC12.63□□□□□ -0.39
BEST4Q8NFU0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
BEST4Q8NFU0 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AC093525.8-201ENST00000624099 1342 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 KHSRPP1-201ENST00000427983 1768 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AL645937.2-201ENST00000396808 931 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 GAPDHP40-201ENST00000505218 1006 ntBASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.62□□□□□ -0.39
BEST4Q8NFU0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms