Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 AC005562.1-201ENST00000583030 3219 ntBASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
SIMC1Q8NDZ2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 KRT223P-202ENST00000449164 1292 ntBASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 MIR4783-201ENST00000580343 82 ntBASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 AL590440.2-201ENST00000641973 1595 ntBASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SIMC1Q8NDZ2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 KHSRPP1-201ENST00000427983 1768 ntBASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC067750.1-201ENST00000608826 6545 ntBASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL136309.1-201ENST00000403917 691 ntBASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
SIMC1Q8NDZ2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms