Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 AC138701.2-201ENST00000553634 226 ntBASIC22.25■■□□□ 1.15
VPS8Q8N3P4 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VPS8Q8N3P4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 GOLGA8DP-202ENST00000341390 2184 ntBASIC22.24■■□□□ 1.15
VPS8Q8N3P4 AC019109.1-201ENST00000401725 1874 ntBASIC22.24■■□□□ 1.15
VPS8Q8N3P4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 KRT8P24-201ENST00000560290 1559 ntBASIC22.24■■□□□ 1.15
VPS8Q8N3P4 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 RPS2P36-201ENST00000456516 831 ntBASIC22.24■■□□□ 1.15
VPS8Q8N3P4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 AC092171.5-201ENST00000608012 942 ntBASIC22.24■■□□□ 1.15
VPS8Q8N3P4 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
VPS8Q8N3P4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 CELP-201ENST00000411440 1249 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AL592076.1-201ENST00000424448 303 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 DNAJB1P1-201ENST00000429417 1024 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 MIR6842-201ENST00000612539 65 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 HPX-213ENST00000615166 826 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AL157996.1-201ENST00000624684 2299 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TEKT4P2-202ENST00000559466 1312 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AC098935.1-201ENST00000446057 611 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VPS8Q8N3P4 AL031713.1-201ENST00000564813 661 ntBASIC22.23■■□□□ 1.15
VPS8Q8N3P4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms