Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RC3H1Q5TC82 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 PGAM1P11-201ENST00000416729 680 ntBASIC17.87■□□□□ 0.45
RC3H1Q5TC82 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RC3H1Q5TC82 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ALG1L7P-201ENST00000502317 768 ntBASIC17.86■□□□□ 0.45
RC3H1Q5TC82 IGHEP2-201ENST00000519308 1256 ntBASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 URAHP-205ENST00000610227 398 ntBASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RC3H1Q5TC82 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 NHP2P1-201ENST00000335274 462 ntBASIC17.85■□□□□ 0.45
RC3H1Q5TC82 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AC104961.1-201ENST00000427605 771 ntBASIC17.85■□□□□ 0.45
RC3H1Q5TC82 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
RC3H1Q5TC82 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms