Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AGGF1P1-201ENST00000509500 2073 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC108734.2-201ENST00000420887 1069 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 SCARNA12-201ENST00000459155 270 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC140658.4-201ENST00000561990 352 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC006548.2-201ENST00000605217 529 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC090386.2-201ENST00000623010 1039 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC005089.1-201ENST00000619486 2241 ntBASIC17.67■□□□□ 0.42
CCDC93Q567U6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCDC93Q567U6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.67■□□□□ 0.42
CCDC93Q567U6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 KHSRPP1-201ENST00000427983 1768 ntBASIC17.66■□□□□ 0.42
CCDC93Q567U6 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC006504.5-208ENST00000588784 2401 ntBASIC17.66■□□□□ 0.42
CCDC93Q567U6 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC010632.2-201ENST00000588369 1224 ntBASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 DGAT2L7P-201ENST00000602462 744 ntBASIC17.66■□□□□ 0.42
CCDC93Q567U6 AL133467.4-201ENST00000602953 725 ntBASIC17.66■□□□□ 0.42
CCDC93Q567U6 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC93Q567U6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.66■□□□□ 0.42
CCDC93Q567U6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC93Q567U6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC93Q567U6 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms