Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 MIR770-201ENST00000390219 98 ntBASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AC138761.1-201ENST00000584393 385 ntBASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AC073592.8-201ENST00000624126 511 ntBASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 PRSS30P-206ENST00000641773 873 ntBASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
ANKRD55Q3KP44 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC125807.2-201ENST00000513358 3514 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 WRB-204ENST00000398753 699 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 HLA-V-204ENST00000476601 1289 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC026410.3-201ENST00000514280 936 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AC131206.1-201ENST00000538078 1211 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 TIMM17BP1-201ENST00000545713 516 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SORD2P-201ENST00000558556 1069 ntBASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
ANKRD55Q3KP44 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
ANKRD55Q3KP44 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms