Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC15.17■□□□□ 0.02
MTHFRP42898 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MTHFRP42898 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MTHFRP42898 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 TCAF2P1-201ENST00000291129 2421 ntBASIC15.16■□□□□ 0.02
MTHFRP42898 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.16■□□□□ 0.02
MTHFRP42898 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MTHFRP42898 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC15.16■□□□□ 0.02
MTHFRP42898 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.16■□□□□ 0.02
MTHFRP42898 AC124068.2-201ENST00000569473 1109 ntBASIC15.16■□□□□ 0.02
MTHFRP42898 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MTHFRP42898 AC073592.2-201ENST00000623062 780 ntBASIC15.16■□□□□ 0.02
MTHFRP42898 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MTHFRP42898 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 REXO1L2P-201ENST00000425429 2069 ntBASIC15.16■□□□□ 0.02
MTHFRP42898 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.16■□□□□ 0.02
MTHFRP42898 SNX18-202ENST00000343017 3140 ntBASIC15.16■□□□□ 0.02
MTHFRP42898 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MTHFRP42898 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MTHFRP42898 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.16■□□□□ 0.02
MTHFRP42898 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 AC013726.1-201ENST00000563747 2285 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 KRT8P28-201ENST00000433288 1390 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 WASH3P-207ENST00000560956 1394 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 AC073869.2-201ENST00000417338 1026 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 ERP29P1-201ENST00000442902 706 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 LINC00634-202ENST00000505157 222 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.15■□□□□ 0.02
MTHFRP42898 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC15.15■□□□□ 0.02
MTHFRP42898 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.15■□□□□ 0.02
MTHFRP42898 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MTHFRP42898 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MTHFRP42898 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms