Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FAM90A15P-201ENST00000514465 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A6P-201ENST00000515148 1394 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A16P-201ENST00000526662 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A9P-201ENST00000527940 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A5P-201ENST00000528738 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A14P-201ENST00000530386 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 FAM90A13P-201ENST00000534703 1395 ntBASIC18.12■□□□□ 0.49
COL15A1P39059 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
COL15A1P39059 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL15A1P39059 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL15A1P39059 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
COL15A1P39059 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 CCT8L1P-201ENST00000465400 1674 ntBASIC18.11■□□□□ 0.49
COL15A1P39059 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC18.11■□□□□ 0.49
COL15A1P39059 KRT17P4-201ENST00000429445 819 ntBASIC18.11■□□□□ 0.49
COL15A1P39059 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.11■□□□□ 0.49
COL15A1P39059 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC18.11■□□□□ 0.49
COL15A1P39059 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.11■□□□□ 0.49
COL15A1P39059 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
COL15A1P39059 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC18.11■□□□□ 0.49
COL15A1P39059 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC18.11■□□□□ 0.49
COL15A1P39059 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.11■□□□□ 0.49
COL15A1P39059 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
COL15A1P39059 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.11■□□□□ 0.49
COL15A1P39059 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL15A1P39059 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL15A1P39059 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
COL15A1P39059 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 COX20P1-201ENST00000366529 357 ntBASIC18.1■□□□□ 0.49
COL15A1P39059 AC006987.1-201ENST00000413610 527 ntBASIC18.1■□□□□ 0.49
COL15A1P39059 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC18.1■□□□□ 0.49
COL15A1P39059 RN7SL767P-201ENST00000493013 295 ntBASIC18.1■□□□□ 0.49
COL15A1P39059 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 AC055811.3-201ENST00000584952 686 ntBASIC18.1■□□□□ 0.49
COL15A1P39059 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC18.1■□□□□ 0.49
COL15A1P39059 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.1■□□□□ 0.49
COL15A1P39059 RNF146-211ENST00000609447 607 ntTSL 4 BASIC18.1■□□□□ 0.49
COL15A1P39059 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.1■□□□□ 0.49
COL15A1P39059 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
COL15A1P39059 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
COL15A1P39059 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
COL15A1P39059 AL672207.1-201ENST00000328462 1570 ntBASIC18.1■□□□□ 0.49
COL15A1P39059 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
COL15A1P39059 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
COL15A1P39059 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL15A1P39059 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
COL15A1P39059 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
COL15A1P39059 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.09■□□□□ 0.49
COL15A1P39059 AL135901.1-201ENST00000451812 333 ntBASIC18.09■□□□□ 0.49
COL15A1P39059 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms