Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
HLA-DOBP13765 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 TMBIM7P-202ENST00000641474 1516 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 MIR658-201ENST00000385210 100 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 DUX4L46-201ENST00000566845 751 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AC132192.2-201ENST00000596206 1147 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 AC133552.6-201ENST00000613406 534 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 COX11-210ENST00000639671 696 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.05□□□□□ -0.32
HLA-DOBP13765 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.05□□□□□ -0.32
HLA-DOBP13765 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
HLA-DOBP13765 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 KRT223P-202ENST00000449164 1292 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 AP005482.1-201ENST00000563722 1273 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 AC009955.4-201ENST00000597192 544 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 AC017083.2-201ENST00000608069 979 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 AC244394.1-201ENST00000435000 1665 ntBASIC13.04□□□□□ -0.32
HLA-DOBP13765 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.04□□□□□ -0.32
HLA-DOBP13765 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
HLA-DOBP13765 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms