Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC18.52■□□□□ 0.55
COL5A2P05997 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 CTBP2P6-201ENST00000526402 1229 ntBASIC18.52■□□□□ 0.55
COL5A2P05997 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC18.52■□□□□ 0.55
COL5A2P05997 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
COL5A2P05997 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 RN7SL602P-201ENST00000578326 324 ntBASIC18.52■□□□□ 0.55
COL5A2P05997 RN7SL718P-201ENST00000581254 303 ntBASIC18.52■□□□□ 0.55
COL5A2P05997 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL5A2P05997 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC18.52■□□□□ 0.55
COL5A2P05997 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 HPD-204ENST00000543163 1709 ntTSL 5 BASIC18.51■□□□□ 0.55
COL5A2P05997 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
COL5A2P05997 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 RPL18AP16-201ENST00000424057 531 ntBASIC18.51■□□□□ 0.55
COL5A2P05997 AL136084.1-201ENST00000449172 318 ntBASIC18.51■□□□□ 0.55
COL5A2P05997 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC18.51■□□□□ 0.55
COL5A2P05997 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC18.51■□□□□ 0.55
COL5A2P05997 NEK4P3-201ENST00000604859 544 ntBASIC18.51■□□□□ 0.55
COL5A2P05997 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.51■□□□□ 0.55
COL5A2P05997 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COL5A2P05997 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
COL5A2P05997 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 HMGA1P1-201ENST00000415560 1062 ntBASIC18.5■□□□□ 0.55
COL5A2P05997 AL137244.1-201ENST00000422931 865 ntBASIC18.5■□□□□ 0.55
COL5A2P05997 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.5■□□□□ 0.55
COL5A2P05997 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 CD44-224ENST00000526669 870 ntTSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 ACY3-202ENST00000529256 933 ntTSL 3 BASIC18.5■□□□□ 0.55
COL5A2P05997 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 AL357143.1-203ENST00000639750 881 ntBASIC18.5■□□□□ 0.55
COL5A2P05997 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 Z98885.3-201ENST00000624882 1757 ntBASIC18.5■□□□□ 0.55
COL5A2P05997 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
COL5A2P05997 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.5■□□□□ 0.55
COL5A2P05997 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COL5A2P05997 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 RN7SL832P-201ENST00000607781 1756 ntBASIC18.49■□□□□ 0.55
COL5A2P05997 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC18.49■□□□□ 0.55
COL5A2P05997 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COL5A2P05997 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COL5A2P05997 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms