Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR3DP05423 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.38■□□□□ 0.37
POLR3DP05423 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR3DP05423 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC17.38■□□□□ 0.37
POLR3DP05423 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR3DP05423 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
POLR3DP05423 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
POLR3DP05423 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR3DP05423 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
POLR3DP05423 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 KRT8P21-201ENST00000430398 1491 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 AC007326.2-201ENST00000624224 7579 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 ISCA2P1-201ENST00000425548 448 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 AC006335.1-201ENST00000445200 547 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC17.37■□□□□ 0.37
POLR3DP05423 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 DDX5-235ENST00000630471 473 ntTSL 4 BASIC17.37■□□□□ 0.37
POLR3DP05423 AC092299.1-201ENST00000632679 757 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 KHSRPP1-201ENST00000427983 1768 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 AC097376.2-205ENST00000610159 5334 ntBASIC17.37■□□□□ 0.37
POLR3DP05423 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.37■□□□□ 0.37
POLR3DP05423 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC17.37■□□□□ 0.37
POLR3DP05423 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.37■□□□□ 0.37
POLR3DP05423 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
POLR3DP05423 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
POLR3DP05423 AL596276.2-201ENST00000447525 331 ntBASIC17.36■□□□□ 0.37
POLR3DP05423 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.36■□□□□ 0.37
POLR3DP05423 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 AL157813.1-201ENST00000612996 587 ntBASIC17.36■□□□□ 0.37
POLR3DP05423 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.36■□□□□ 0.37
POLR3DP05423 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
POLR3DP05423 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.36■□□□□ 0.37
POLR3DP05423 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.36■□□□□ 0.37
POLR3DP05423 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR3DP05423 AC018629.1-201ENST00000623381 1736 ntBASIC17.35■□□□□ 0.37
POLR3DP05423 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR3DP05423 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR3DP05423 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
POLR3DP05423 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.35■□□□□ 0.37
POLR3DP05423 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms