Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NUAK2-201ENST00000367157 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL845472.1-202ENST00000624675 4080 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SPRTN-202ENST00000295050 3468 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 BHMT2-201ENST00000255192 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PFKM-202ENST00000340802 3176 ntTSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC132008.2-207ENST00000454517 770 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL732292.2-201ENST00000609649 430 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL139288.1-201ENST00000623748 933 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CCAR2-206ENST00000520861 3560 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AP005117.1-201ENST00000584346 1413 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC009108.4-201ENST00000623284 2451 ntBASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC000068.1-201ENST00000431090 2097 ntTSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AL589702.1-201ENST00000641229 1509 ntBASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KRI1-201ENST00000312962 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC018645.3-201ENST00000628855 2646 ntBASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 TRIM68-201ENST00000300747 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC106795.1-205ENST00000512851 1056 ntBASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 LIMK2-202ENST00000333611 3462 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
BOLA2-SMG1P6H3BVE0 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms