Protein–RNA interactions for Protein: Q9UHC1

MLH3, DNA mismatch repair protein Mlh3, humanhuman

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MLH3Q9UHC1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MLH3Q9UHC1 AC013268.4-201ENST00000637413 2228 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC000077.1-201ENST00000420012 953 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CD37-203ENST00000426897 1204 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC006328.1-201ENST00000437571 379 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 TPT1P6-201ENST00000458298 514 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AP000640.1-201ENST00000525337 879 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CCND3P2-201ENST00000579393 537 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC006986.1-201ENST00000612764 241 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC103702.1-201ENST00000548801 2630 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC007950.2-201ENST00000615045 2347 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 LINC00554-201ENST00000564841 3011 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 RPSAP6-201ENST00000417882 882 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 KRT19P4-201ENST00000443208 943 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 MBP-230ENST00000528160 584 ntTSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 RN7SL480P-201ENST00000581481 294 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AC005865.2-202ENST00000635814 725 ntBASIC20.75■□□□□ 0.91
MLH3Q9UHC1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
MLH3Q9UHC1 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 RN7SL832P-201ENST00000607781 1756 ntBASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 SNU13-204ENST00000402458 462 ntTSL 3 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 AC093700.1-201ENST00000503348 717 ntBASIC20.74■□□□□ 0.91
MLH3Q9UHC1 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC20.74■□□□□ 0.91
MLH3Q9UHC1 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms