Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC074338.1-201ENST00000416825 156 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC068137.2-201ENST00000605408 478 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC015688.4-201ENST00000580780 1647 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC008620.2-201ENST00000510294 1569 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AL121723.1-201ENST00000445194 1519 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 NLRC3-202ENST00000359128 6401 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 AC026271.4-201ENST00000578214 1833 ntBASIC14.25□□□□□ -0.13
RAB3IPQ96QF0 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 AL136172.1-201ENST00000598590 1394 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 BCAR1-209ENST00000546196 1340 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 GHET1-201ENST00000627071 1906 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 IGHV3-22-201ENST00000520721 359 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 BX324167.2-201ENST00000623717 3316 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 AC115284.2-201ENST00000624646 2054 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 PCDHB19P-202ENST00000625133 2914 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 AL445250.1-201ENST00000641671 2259 ntBASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB3IPQ96QF0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB3IPQ96QF0 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms