Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MOG-219ENST00000376898 1027 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CYP4F62P-201ENST00000417310 524 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CD81-209ENST00000492627 886 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MEG3-223ENST00000524131 721 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CMC2-223ENST00000570195 871 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AL355376.2-202ENST00000604686 241 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 NCR1-205ENST00000594765 1612 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CDK7-202ENST00000502604 1455 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AL157395.1-201ENST00000427630 438 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 VDAC1P12-201ENST00000451853 882 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MTND6P9-201ENST00000458075 519 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 YBX1P3-201ENST00000468366 909 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC116553.1-201ENST00000561752 397 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 STRADA-211ENST00000579340 1168 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MIR663AHG-230ENST00000609012 708 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 RPS20P22-202ENST00000488192 1318 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 PRM1-201ENST00000312511 424 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 OR2W2P-201ENST00000406313 909 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC139713.1-201ENST00000515019 321 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 GMNN-207ENST00000620958 1039 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 AC004494.2-201ENST00000623168 830 ntBASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ST5-258ENST00000534278 1352 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC5.61□□□□□ -1.51
SYNE2Q8WXH0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 KLK8-201ENST00000291726 853 ntTSL 5 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 PAX5-206ENST00000414447 1056 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC114489.1-201ENST00000421619 395 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 RN7SL309P-201ENST00000491364 286 ntBASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AC091057.1-201ENST00000501830 970 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYNE2Q8WXH0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms