Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TMC1Q8TDI8 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AC092506.1-202ENST00000401022 528 ntBASIC20.21■□□□□ 0.83
TMC1Q8TDI8 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.21■□□□□ 0.83
TMC1Q8TDI8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 NAT9-211ENST00000580632 799 ntTSL 3 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AL353770.1-201ENST00000614915 403 ntBASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AC018629.1-201ENST00000623381 1736 ntBASIC20.21■□□□□ 0.83
TMC1Q8TDI8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TMC1Q8TDI8 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC20.2■□□□□ 0.83
TMC1Q8TDI8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AC239868.1-201ENST00000369385 493 ntBASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 IRF3-215ENST00000596822 823 ntTSL 3 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TMC1Q8TDI8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms