Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 KF455155.1-201ENST00000604493 303 ntBASIC17.17■□□□□ 0.34
SLX4Q8IY92 AC005746.3-201ENST00000614751 393 ntBASIC17.17■□□□□ 0.34
SLX4Q8IY92 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLX4Q8IY92 AC245369.7-201ENST00000631386 350 ntBASIC17.17■□□□□ 0.34
SLX4Q8IY92 AL357143.1-203ENST00000639750 881 ntBASIC17.17■□□□□ 0.34
SLX4Q8IY92 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLX4Q8IY92 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLX4Q8IY92 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 AC073347.1-201ENST00000421633 2643 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CDK4P1-201ENST00000454213 828 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 RN7SL602P-201ENST00000578326 324 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 MIR4254-201ENST00000581063 76 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 RN7SL718P-201ENST00000581254 303 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 FAM226B-201ENST00000602508 1490 ntBASIC17.16■□□□□ 0.34
SLX4Q8IY92 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLX4Q8IY92 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLX4Q8IY92 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 MIR2278-201ENST00000516344 96 ntBASIC17.15■□□□□ 0.34
SLX4Q8IY92 ACY3-202ENST00000529256 933 ntTSL 3 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 Z98885.3-201ENST00000624882 1757 ntBASIC17.15■□□□□ 0.34
SLX4Q8IY92 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
SLX4Q8IY92 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLX4Q8IY92 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLX4Q8IY92 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLX4Q8IY92 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SLX4Q8IY92 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLX4Q8IY92 AC092810.2-201ENST00000431570 362 ntBASIC17.14■□□□□ 0.34
SLX4Q8IY92 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 FAM187B2P-201ENST00000577135 713 ntBASIC17.14■□□□□ 0.34
SLX4Q8IY92 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
SLX4Q8IY92 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
SLX4Q8IY92 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC17.14■□□□□ 0.33
SLX4Q8IY92 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC17.14■□□□□ 0.33
SLX4Q8IY92 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLX4Q8IY92 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SLX4Q8IY92 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLX4Q8IY92 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 764 ms