Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 C18orf15-201ENST00000623680 2534 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 TMBIM7P-203ENST00000641617 1718 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 AP005212.2-201ENST00000584979 510 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 AP005264.6-204ENST00000588436 719 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 AL118522.1-201ENST00000611368 560 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 MIR6746-201ENST00000620971 63 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 LINC00244-201ENST00000625073 613 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.7■□□□□ 0.42
CCDC93Q567U6 BRD7P5-201ENST00000299197 1822 ntBASIC17.7■□□□□ 0.42
CCDC93Q567U6 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCDC93Q567U6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ACTG1P19-201ENST00000418987 1116 ntBASIC17.69■□□□□ 0.42
CCDC93Q567U6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 AC112693.3-201ENST00000624819 1983 ntBASIC17.69■□□□□ 0.42
CCDC93Q567U6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
CCDC93Q567U6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCDC93Q567U6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 AC093826.1-201ENST00000508655 993 ntBASIC17.68■□□□□ 0.42
CCDC93Q567U6 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCDC93Q567U6 AC010976.2-201ENST00000609697 852 ntBASIC17.68■□□□□ 0.42
CCDC93Q567U6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCDC93Q567U6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms