Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 MIR557-201ENST00000385239 98 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 TSPY25P-201ENST00000429463 745 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 NPM1P43-201ENST00000558669 786 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 U62317.3-201ENST00000608319 855 ntBASIC17.4■□□□□ 0.38
RFX7Q2KHR2 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC17.4■□□□□ 0.38
RFX7Q2KHR2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RFX7Q2KHR2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC17.39■□□□□ 0.38
RFX7Q2KHR2 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AC015909.3-201ENST00000572855 1794 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 SHMT1P1-201ENST00000419974 1312 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 KRT18P15-201ENST00000458108 1291 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AC008267.1-201ENST00000474858 1069 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 IQSEC3P1-201ENST00000538799 536 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AC140658.4-201ENST00000561990 352 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AP003419.4-201ENST00000616071 517 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 AP002353.1-201ENST00000528257 1599 ntBASIC17.39■□□□□ 0.37
RFX7Q2KHR2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.39■□□□□ 0.37
RFX7Q2KHR2 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FAM90A2P-201ENST00000511144 1395 ntBASIC17.38■□□□□ 0.37
RFX7Q2KHR2 FAM90A25P-201ENST00000528404 1395 ntBASIC17.38■□□□□ 0.37
RFX7Q2KHR2 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms