Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP1Q04837 AL138828.2-201ENST00000615812 383 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.33□□□□□ -0.44
SSBP1Q04837 BX640515.1-201ENST00000617215 977 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 SPDYE12P-201ENST00000618416 771 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 CR392039.2-201ENST00000623182 509 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 AC007431.3-201ENST00000623221 587 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SSBP1Q04837 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SSBP1Q04837 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SSBP1Q04837 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.33□□□□□ -0.44
SSBP1Q04837 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 STRCP1-201ENST00000509801 5328 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 AC107375.1-201ENST00000564464 2231 ntBASIC12.33□□□□□ -0.44
SSBP1Q04837 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SSBP1Q04837 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SSBP1Q04837 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 AC026271.4-201ENST00000578214 1833 ntBASIC12.32□□□□□ -0.44
SSBP1Q04837 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 RN7SKP230-201ENST00000365642 335 ntBASIC12.32□□□□□ -0.44
SSBP1Q04837 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
SSBP1Q04837 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 AC023141.5-201ENST00000458585 616 ntBASIC12.32□□□□□ -0.44
SSBP1Q04837 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 ALG1L5P-201ENST00000482043 771 ntBASIC12.32□□□□□ -0.44
SSBP1Q04837 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
SSBP1Q04837 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.32□□□□□ -0.44
SSBP1Q04837 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.32□□□□□ -0.44
SSBP1Q04837 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 AL928654.5-201ENST00000624831 2501 ntBASIC12.32□□□□□ -0.44
SSBP1Q04837 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SSBP1Q04837 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
SSBP1Q04837 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SSBP1Q04837 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.31□□□□□ -0.44
SSBP1Q04837 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SSBP1Q04837 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms