Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
ACTA1P68133 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACTA1P68133 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACTA1P68133 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
ACTA1P68133 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
ACTA1P68133 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
ACTA1P68133 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
ACTA1P68133 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
ACTA1P68133 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
ACTA1P68133 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
ACTA1P68133 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 ACKR1-201ENST00000368121 1240 ntBASIC13.02□□□□□ -0.33
ACTA1P68133 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 AL512638.1-201ENST00000457493 794 ntBASIC13.02□□□□□ -0.33
ACTA1P68133 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.02□□□□□ -0.33
ACTA1P68133 AC027237.1-201ENST00000560942 655 ntBASIC13.02□□□□□ -0.33
ACTA1P68133 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.02□□□□□ -0.33
ACTA1P68133 AC093726.1-201ENST00000608064 963 ntBASIC13.02□□□□□ -0.33
ACTA1P68133 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.02□□□□□ -0.33
ACTA1P68133 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
ACTA1P68133 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 AC020658.7-201ENST00000624274 2442 ntBASIC13.02□□□□□ -0.33
ACTA1P68133 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.02□□□□□ -0.33
ACTA1P68133 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
ACTA1P68133 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 AC027612.1-201ENST00000445234 2395 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 DGCR9-201ENST00000609630 2415 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.01□□□□□ -0.33
ACTA1P68133 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
ACTA1P68133 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.01□□□□□ -0.33
ACTA1P68133 ARSEP1-201ENST00000420443 635 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.01□□□□□ -0.33
ACTA1P68133 PUDPP3-201ENST00000445368 636 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.01□□□□□ -0.33
ACTA1P68133 AC093214.1-201ENST00000511688 1107 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
ACTA1P68133 AL359711.2-201ENST00000563105 872 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 AC005586.2-201ENST00000563946 837 ntBASIC13.01□□□□□ -0.33
ACTA1P68133 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms