Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.61□□□□□ -0.07
AP1S1P61966 FNTAP2-201ENST00000430308 634 ntBASIC14.61□□□□□ -0.07
AP1S1P61966 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.61□□□□□ -0.07
AP1S1P61966 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.61□□□□□ -0.07
AP1S1P61966 NAP1L6-202ENST00000641404 1222 ntBASIC14.61□□□□□ -0.07
AP1S1P61966 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.61□□□□□ -0.07
AP1S1P61966 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 TUBBP5-203ENST00000508529 1334 ntBASIC14.61□□□□□ -0.07
AP1S1P61966 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AP1S1P61966 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
AP1S1P61966 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.61□□□□□ -0.07
AP1S1P61966 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.61□□□□□ -0.07
AP1S1P61966 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
AP1S1P61966 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
AP1S1P61966 CALR4P-201ENST00000431943 946 ntBASIC14.6□□□□□ -0.07
AP1S1P61966 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.6□□□□□ -0.07
AP1S1P61966 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC14.6□□□□□ -0.07
AP1S1P61966 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC14.6□□□□□ -0.07
AP1S1P61966 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.6□□□□□ -0.07
AP1S1P61966 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AP1S1P61966 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
AP1S1P61966 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AP1S1P61966 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP1S1P61966 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 KRT8P21-201ENST00000430398 1491 ntBASIC14.59□□□□□ -0.07
AP1S1P61966 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.59□□□□□ -0.07
AP1S1P61966 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.59□□□□□ -0.07
AP1S1P61966 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
AP1S1P61966 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.59□□□□□ -0.07
AP1S1P61966 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
AP1S1P61966 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
AP1S1P61966 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms