Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 KRT8P48-201ENST00000515599 1220 ntBASIC12.54□□□□□ -0.4
AP3S2P59780 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.54□□□□□ -0.4
AP3S2P59780 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.54□□□□□ -0.4
AP3S2P59780 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.54□□□□□ -0.4
AP3S2P59780 AC007967.4-201ENST00000614700 386 ntBASIC12.54□□□□□ -0.4
AP3S2P59780 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.54□□□□□ -0.4
AP3S2P59780 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
AP3S2P59780 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP3S2P59780 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AC010970.1-201ENST00000445125 1848 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AL592309.1-201ENST00000443127 649 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.53□□□□□ -0.4
AP3S2P59780 ALG1L8P-201ENST00000533887 760 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 SORD2P-201ENST00000558556 1069 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.53□□□□□ -0.4
AP3S2P59780 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AL033527.5-202ENST00000641632 1098 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AC073869.1-201ENST00000415574 2762 ntBASIC12.53□□□□□ -0.4
AP3S2P59780 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.53□□□□□ -0.4
AP3S2P59780 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
AP3S2P59780 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
AP3S2P59780 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
AP3S2P59780 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
AP3S2P59780 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.53□□□□□ -0.4
AP3S2P59780 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms