Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CCT8L1P-201ENST00000465400 1674 ntBASIC18.29■□□□□ 0.52
ATP6V1AP38606 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 OR51A9P-201ENST00000422578 911 ntBASIC18.29■□□□□ 0.52
ATP6V1AP38606 AC063952.3-201ENST00000467756 308 ntBASIC18.29■□□□□ 0.52
ATP6V1AP38606 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 VENTXP3-201ENST00000546480 773 ntBASIC18.29■□□□□ 0.52
ATP6V1AP38606 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
ATP6V1AP38606 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ATP6V1AP38606 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 BX679664.3-201ENST00000414070 555 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC113935.1-201ENST00000471722 555 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC120057.1-201ENST00000483947 663 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC008026.2-201ENST00000495438 348 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC013553.1-201ENST00000560906 267 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 AP005264.5-201ENST00000590066 467 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 AL359091.4-201ENST00000610052 409 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.28■□□□□ 0.52
ATP6V1AP38606 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 AL109954.1-202ENST00000564051 2148 ntBASIC18.28■□□□□ 0.52
ATP6V1AP38606 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ATP6V1AP38606 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ATP6V1AP38606 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.27■□□□□ 0.52
ATP6V1AP38606 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms